Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
RPL39P62891 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RPL39P62891 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC14.15□□□□□ -0.14
RPL39P62891 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RPL39P62891 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC14.15□□□□□ -0.14
RPL39P62891 AC093503.3-201ENST00000624917 2352 ntBASIC14.15□□□□□ -0.14
RPL39P62891 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RPL39P62891 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC14.15□□□□□ -0.15
RPL39P62891 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.15
RPL39P62891 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RPL39P62891 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RPL39P62891 NEFHP1-201ENST00000412845 2629 ntBASIC14.14□□□□□ -0.15
RPL39P62891 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RPL39P62891 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
RPL39P62891 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RPL39P62891 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RPL39P62891 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RPL39P62891 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RPL39P62891 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC14.14□□□□□ -0.15
RPL39P62891 AC245052.3-201ENST00000450182 901 ntBASIC14.14□□□□□ -0.15
RPL39P62891 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC14.14□□□□□ -0.15
RPL39P62891 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RPL39P62891 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC14.14□□□□□ -0.15
RPL39P62891 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RPL39P62891 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
RPL39P62891 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC14.14□□□□□ -0.15
RPL39P62891 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RPL39P62891 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC14.14□□□□□ -0.15
RPL39P62891 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC14.14□□□□□ -0.15
RPL39P62891 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RPL39P62891 TSPY26P-201ENST00000476365 1326 ntBASIC14.14□□□□□ -0.15
RPL39P62891 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RPL39P62891 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RPL39P62891 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC14.13□□□□□ -0.15
RPL39P62891 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
RPL39P62891 EML3-217ENST00000531557 2509 ntTSL 5 BASIC14.13□□□□□ -0.15
RPL39P62891 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RPL39P62891 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
RPL39P62891 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
RPL39P62891 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
RPL39P62891 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
RPL39P62891 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RPL39P62891 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC14.13□□□□□ -0.15
RPL39P62891 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC14.13□□□□□ -0.15
RPL39P62891 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
RPL39P62891 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
RPL39P62891 POU5F1P4-201ENST00000413175 1085 ntBASIC14.13□□□□□ -0.15
RPL39P62891 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RPL39P62891 AL356441.2-201ENST00000443009 864 ntBASIC14.13□□□□□ -0.15
RPL39P62891 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC14.13□□□□□ -0.15
RPL39P62891 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC14.13□□□□□ -0.15
RPL39P62891 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC14.13□□□□□ -0.15
RPL39P62891 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
RPL39P62891 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
RPL39P62891 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
RPL39P62891 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
RPL39P62891 AC116050.2-201ENST00000612102 1779 ntBASIC14.13□□□□□ -0.15
RPL39P62891 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RPL39P62891 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC14.13□□□□□ -0.15
RPL39P62891 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RPL39P62891 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RPL39P62891 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC14.13□□□□□ -0.15
RPL39P62891 BX119927.1-201ENST00000636596 1552 ntBASIC14.13□□□□□ -0.15
RPL39P62891 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RPL39P62891 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
RPL39P62891 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
RPL39P62891 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RPL39P62891 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RPL39P62891 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RPL39P62891 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RPL39P62891 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RPL39P62891 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC14.12□□□□□ -0.15
RPL39P62891 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC14.12□□□□□ -0.15
RPL39P62891 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RPL39P62891 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC14.12□□□□□ -0.15
RPL39P62891 AC008764.7-201ENST00000593779 1081 ntBASIC14.12□□□□□ -0.15
RPL39P62891 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RPL39P62891 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RPL39P62891 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RPL39P62891 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RPL39P62891 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RPL39P62891 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC14.12□□□□□ -0.15
RPL39P62891 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC14.12□□□□□ -0.15
RPL39P62891 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
RPL39P62891 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RPL39P62891 HCG11-201ENST00000411553 5696 ntBASIC14.12□□□□□ -0.15
RPL39P62891 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RPL39P62891 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC14.12□□□□□ -0.15
RPL39P62891 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RPL39P62891 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RPL39P62891 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RPL39P62891 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RPL39P62891 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
RPL39P62891 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RPL39P62891 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RPL39P62891 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC14.11□□□□□ -0.15
RPL39P62891 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC14.11□□□□□ -0.15
RPL39P62891 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RPL39P62891 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
RPL39P62891 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms