Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
CKS1BP61024 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.17
CKS1BP61024 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CKS1BP61024 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
CKS1BP61024 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CKS1BP61024 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC13.96□□□□□ -0.18
CKS1BP61024 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CKS1BP61024 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC13.96□□□□□ -0.18
CKS1BP61024 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC13.96□□□□□ -0.18
CKS1BP61024 TNRC18P3-201ENST00000441896 2691 ntBASIC13.96□□□□□ -0.18
CKS1BP61024 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CKS1BP61024 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CKS1BP61024 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC13.95□□□□□ -0.18
CKS1BP61024 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CKS1BP61024 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC13.95□□□□□ -0.18
CKS1BP61024 AL513477.1-201ENST00000602865 2407 ntBASIC13.95□□□□□ -0.18
CKS1BP61024 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CKS1BP61024 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC13.95□□□□□ -0.18
CKS1BP61024 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CKS1BP61024 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CKS1BP61024 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CKS1BP61024 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CKS1BP61024 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC13.95□□□□□ -0.18
CKS1BP61024 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CKS1BP61024 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CKS1BP61024 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CKS1BP61024 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CKS1BP61024 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CKS1BP61024 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CKS1BP61024 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC13.95□□□□□ -0.18
CKS1BP61024 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CKS1BP61024 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
CKS1BP61024 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
CKS1BP61024 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CKS1BP61024 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC13.95□□□□□ -0.18
CKS1BP61024 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CKS1BP61024 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CKS1BP61024 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CKS1BP61024 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC13.95□□□□□ -0.18
CKS1BP61024 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CKS1BP61024 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CKS1BP61024 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CKS1BP61024 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CKS1BP61024 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CKS1BP61024 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CKS1BP61024 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
CKS1BP61024 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CKS1BP61024 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC13.94□□□□□ -0.18
CKS1BP61024 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CKS1BP61024 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC13.94□□□□□ -0.18
CKS1BP61024 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CKS1BP61024 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CKS1BP61024 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
CKS1BP61024 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CKS1BP61024 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CKS1BP61024 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CKS1BP61024 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
CKS1BP61024 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CKS1BP61024 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CKS1BP61024 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC13.94□□□□□ -0.18
CKS1BP61024 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CKS1BP61024 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CKS1BP61024 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC13.94□□□□□ -0.18
CKS1BP61024 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CKS1BP61024 SRR-208ENST00000576848 588 ntTSL 4 BASIC13.94□□□□□ -0.18
CKS1BP61024 AC136469.2-201ENST00000623944 1028 ntBASIC13.94□□□□□ -0.18
CKS1BP61024 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CKS1BP61024 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC13.94□□□□□ -0.18
CKS1BP61024 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CKS1BP61024 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CKS1BP61024 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC13.94□□□□□ -0.18
CKS1BP61024 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CKS1BP61024 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CKS1BP61024 NARF-205ENST00000412079 1760 ntTSL 5 BASIC13.94□□□□□ -0.18
CKS1BP61024 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CKS1BP61024 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CKS1BP61024 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC13.93□□□□□ -0.18
CKS1BP61024 STX5-203ENST00000394690 1568 ntTSL 5 BASIC13.93□□□□□ -0.18
CKS1BP61024 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CKS1BP61024 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC13.93□□□□□ -0.18
CKS1BP61024 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
CKS1BP61024 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CKS1BP61024 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
CKS1BP61024 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
CKS1BP61024 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CKS1BP61024 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CKS1BP61024 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CKS1BP61024 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CKS1BP61024 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CKS1BP61024 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CKS1BP61024 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CKS1BP61024 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CKS1BP61024 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC13.93□□□□□ -0.18
CKS1BP61024 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC13.93□□□□□ -0.18
CKS1BP61024 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CKS1BP61024 SERBP1P1-201ENST00000396021 1160 ntBASIC13.93□□□□□ -0.18
CKS1BP61024 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC13.93□□□□□ -0.18
CKS1BP61024 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
CKS1BP61024 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC13.93□□□□□ -0.18
CKS1BP61024 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms