Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN2P57739 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN2P57739 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CLDN2P57739 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN2P57739 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN2P57739 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.81■□□□□ 0.76
CLDN2P57739 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN2P57739 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.81■□□□□ 0.76
CLDN2P57739 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CLDN2P57739 AL031963.3-201ENST00000606441 850 ntBASIC19.81■□□□□ 0.76
CLDN2P57739 AC113410.3-201ENST00000623366 203 ntBASIC19.81■□□□□ 0.76
CLDN2P57739 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN2P57739 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN2P57739 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
CLDN2P57739 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.81■□□□□ 0.76
CLDN2P57739 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN2P57739 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.81■□□□□ 0.76
CLDN2P57739 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN2P57739 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.8■□□□□ 0.76
CLDN2P57739 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN2P57739 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CLDN2P57739 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN2P57739 NBPF21P-201ENST00000425093 1451 ntBASIC19.8■□□□□ 0.76
CLDN2P57739 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CLDN2P57739 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN2P57739 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.8■□□□□ 0.76
CLDN2P57739 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CLDN2P57739 KRT8P20-201ENST00000423953 1409 ntBASIC19.8■□□□□ 0.76
CLDN2P57739 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN2P57739 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN2P57739 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CLDN2P57739 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN2P57739 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.8■□□□□ 0.76
CLDN2P57739 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.8■□□□□ 0.76
CLDN2P57739 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.8■□□□□ 0.76
CLDN2P57739 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.8■□□□□ 0.76
CLDN2P57739 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.8■□□□□ 0.76
CLDN2P57739 RARRES2P10-201ENST00000564312 460 ntBASIC19.8■□□□□ 0.76
CLDN2P57739 AL121906.2-201ENST00000621597 723 ntBASIC19.8■□□□□ 0.76
CLDN2P57739 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN2P57739 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN2P57739 AC007225.1-201ENST00000566331 1836 ntBASIC19.8■□□□□ 0.76
CLDN2P57739 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CLDN2P57739 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.8■□□□□ 0.76
CLDN2P57739 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN2P57739 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN2P57739 AL135905.2-201ENST00000584934 1404 ntBASIC19.79■□□□□ 0.76
CLDN2P57739 DPP3P2-201ENST00000416030 1696 ntBASIC19.79■□□□□ 0.76
CLDN2P57739 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN2P57739 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN2P57739 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN2P57739 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN2P57739 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
CLDN2P57739 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN2P57739 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.79■□□□□ 0.76
CLDN2P57739 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.79■□□□□ 0.76
CLDN2P57739 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN2P57739 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN2P57739 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN2P57739 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN2P57739 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN2P57739 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN2P57739 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN2P57739 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.78■□□□□ 0.76
CLDN2P57739 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.78■□□□□ 0.76
CLDN2P57739 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.78■□□□□ 0.76
CLDN2P57739 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN2P57739 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.78■□□□□ 0.76
CLDN2P57739 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN2P57739 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN2P57739 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.78■□□□□ 0.76
CLDN2P57739 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CLDN2P57739 AP001412.1-201ENST00000608405 714 ntBASIC19.78■□□□□ 0.76
CLDN2P57739 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.78■□□□□ 0.76
CLDN2P57739 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN2P57739 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN2P57739 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN2P57739 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.78■□□□□ 0.76
CLDN2P57739 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN2P57739 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN2P57739 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN2P57739 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN2P57739 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CLDN2P57739 KRT8P17-201ENST00000453110 1448 ntBASIC19.77■□□□□ 0.76
CLDN2P57739 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN2P57739 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.77■□□□□ 0.76
CLDN2P57739 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.77■□□□□ 0.76
CLDN2P57739 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
CLDN2P57739 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN2P57739 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN2P57739 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.77■□□□□ 0.76
CLDN2P57739 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
CLDN2P57739 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
CLDN2P57739 TSPY15P-201ENST00000457163 923 ntBASIC19.77■□□□□ 0.76
CLDN2P57739 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.77■□□□□ 0.76
CLDN2P57739 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.77■□□□□ 0.76
CLDN2P57739 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.77■□□□□ 0.76
CLDN2P57739 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CLDN2P57739 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN2P57739 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms