Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
RIPK4P57078 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC26.27■■□□□ 1.8
RIPK4P57078 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC26.27■■□□□ 1.8
RIPK4P57078 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
RIPK4P57078 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
RIPK4P57078 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
RIPK4P57078 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
RIPK4P57078 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
RIPK4P57078 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
RIPK4P57078 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
RIPK4P57078 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
RIPK4P57078 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
RIPK4P57078 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC26.26■■□□□ 1.79
RIPK4P57078 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC26.26■■□□□ 1.79
RIPK4P57078 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC26.26■■□□□ 1.79
RIPK4P57078 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC26.26■■□□□ 1.79
RIPK4P57078 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
RIPK4P57078 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
RIPK4P57078 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
RIPK4P57078 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
RIPK4P57078 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC26.26■■□□□ 1.79
RIPK4P57078 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC26.26■■□□□ 1.79
RIPK4P57078 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC26.26■■□□□ 1.79
RIPK4P57078 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC26.25■■□□□ 1.79
RIPK4P57078 AL162377.1-201ENST00000618844 1793 ntBASIC26.25■■□□□ 1.79
RIPK4P57078 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
RIPK4P57078 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
RIPK4P57078 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
RIPK4P57078 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
RIPK4P57078 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC26.25■■□□□ 1.79
RIPK4P57078 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
RIPK4P57078 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
RIPK4P57078 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC26.25■■□□□ 1.79
RIPK4P57078 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC26.25■■□□□ 1.79
RIPK4P57078 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
RIPK4P57078 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC26.25■■□□□ 1.79
RIPK4P57078 AC098590.1-201ENST00000468126 897 ntBASIC26.25■■□□□ 1.79
RIPK4P57078 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC26.25■■□□□ 1.79
RIPK4P57078 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
RIPK4P57078 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
RIPK4P57078 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
RIPK4P57078 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
RIPK4P57078 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC26.24■■□□□ 1.79
RIPK4P57078 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
RIPK4P57078 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC26.24■■□□□ 1.79
RIPK4P57078 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC26.24■■□□□ 1.79
RIPK4P57078 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
RIPK4P57078 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC26.24■■□□□ 1.79
RIPK4P57078 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC26.24■■□□□ 1.79
RIPK4P57078 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
RIPK4P57078 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
RIPK4P57078 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
RIPK4P57078 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC26.24■■□□□ 1.79
RIPK4P57078 IRX5-204ENST00000560154 879 ntTSL 5 BASIC26.24■■□□□ 1.79
RIPK4P57078 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
RIPK4P57078 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC26.24■■□□□ 1.79
RIPK4P57078 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
RIPK4P57078 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
RIPK4P57078 PKD1P6-201ENST00000343738 4769 ntBASIC26.24■■□□□ 1.79
RIPK4P57078 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
RIPK4P57078 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
RIPK4P57078 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
RIPK4P57078 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
RIPK4P57078 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC26.23■■□□□ 1.79
RIPK4P57078 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RIPK4P57078 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
RIPK4P57078 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC26.23■■□□□ 1.79
RIPK4P57078 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
RIPK4P57078 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
RIPK4P57078 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC26.23■■□□□ 1.79
RIPK4P57078 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC26.23■■□□□ 1.79
RIPK4P57078 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
RIPK4P57078 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC26.23■■□□□ 1.79
RIPK4P57078 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC26.23■■□□□ 1.79
RIPK4P57078 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
RIPK4P57078 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
RIPK4P57078 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RIPK4P57078 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC26.23■■□□□ 1.79
RIPK4P57078 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC26.23■■□□□ 1.79
RIPK4P57078 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC26.22■■□□□ 1.79
RIPK4P57078 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
RIPK4P57078 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC26.22■■□□□ 1.79
RIPK4P57078 RN7SL471P-201ENST00000580476 299 ntBASIC26.22■■□□□ 1.79
RIPK4P57078 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC26.22■■□□□ 1.79
RIPK4P57078 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
RIPK4P57078 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
RIPK4P57078 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
RIPK4P57078 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
RIPK4P57078 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
RIPK4P57078 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC26.21■■□□□ 1.79
RIPK4P57078 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC26.21■■□□□ 1.79
RIPK4P57078 AL391422.3-201ENST00000603791 2761 ntBASIC26.21■■□□□ 1.79
RIPK4P57078 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
RIPK4P57078 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC26.21■■□□□ 1.79
RIPK4P57078 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
RIPK4P57078 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC26.21■■□□□ 1.79
RIPK4P57078 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
RIPK4P57078 MTDHP1-201ENST00000605323 784 ntBASIC26.21■■□□□ 1.79
RIPK4P57078 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC26.21■■□□□ 1.79
RIPK4P57078 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms