Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PEX3P56589 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
PEX3P56589 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
PEX3P56589 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC22.09■■□□□ 1.13
PEX3P56589 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PEX3P56589 ABHD17AP1-201ENST00000358206 933 ntBASIC22.09■■□□□ 1.13
PEX3P56589 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
PEX3P56589 FAM201B-201ENST00000458407 597 ntBASIC22.09■■□□□ 1.13
PEX3P56589 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC22.09■■□□□ 1.13
PEX3P56589 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
PEX3P56589 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
PEX3P56589 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC22.09■■□□□ 1.13
PEX3P56589 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC22.09■■□□□ 1.13
PEX3P56589 KLF2-202ENST00000592003 564 ntTSL 3 BASIC22.09■■□□□ 1.13
PEX3P56589 AC008687.6-201ENST00000596318 630 ntBASIC22.09■■□□□ 1.13
PEX3P56589 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PEX3P56589 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
PEX3P56589 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC22.09■■□□□ 1.13
PEX3P56589 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PEX3P56589 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC22.08■■□□□ 1.13
PEX3P56589 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
PEX3P56589 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
PEX3P56589 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
PEX3P56589 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC22.08■■□□□ 1.13
PEX3P56589 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC22.08■■□□□ 1.13
PEX3P56589 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC22.08■■□□□ 1.13
PEX3P56589 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
PEX3P56589 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC22.08■■□□□ 1.13
PEX3P56589 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC22.08■■□□□ 1.13
PEX3P56589 AL391422.3-201ENST00000603791 2761 ntBASIC22.08■■□□□ 1.13
PEX3P56589 AL162377.1-201ENST00000618844 1793 ntBASIC22.08■■□□□ 1.13
PEX3P56589 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC22.08■■□□□ 1.13
PEX3P56589 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC22.08■■□□□ 1.13
PEX3P56589 ADM-205ENST00000528544 586 ntTSL 2 BASIC22.08■■□□□ 1.13
PEX3P56589 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC22.08■■□□□ 1.13
PEX3P56589 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
PEX3P56589 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
PEX3P56589 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
PEX3P56589 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
PEX3P56589 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
PEX3P56589 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC22.07■■□□□ 1.12
PEX3P56589 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
PEX3P56589 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC22.07■■□□□ 1.12
PEX3P56589 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PEX3P56589 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PEX3P56589 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PEX3P56589 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC22.07■■□□□ 1.12
PEX3P56589 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
PEX3P56589 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
PEX3P56589 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
PEX3P56589 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC22.07■■□□□ 1.12
PEX3P56589 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC22.07■■□□□ 1.12
PEX3P56589 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
PEX3P56589 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC22.06■■□□□ 1.12
PEX3P56589 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
PEX3P56589 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PEX3P56589 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC22.06■■□□□ 1.12
PEX3P56589 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
PEX3P56589 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC22.06■■□□□ 1.12
PEX3P56589 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PEX3P56589 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
PEX3P56589 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PEX3P56589 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PEX3P56589 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC22.06■■□□□ 1.12
PEX3P56589 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC22.06■■□□□ 1.12
PEX3P56589 AC120498.8-201ENST00000614275 531 ntBASIC22.06■■□□□ 1.12
PEX3P56589 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
PEX3P56589 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
PEX3P56589 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
PEX3P56589 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
PEX3P56589 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PEX3P56589 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC22.05■■□□□ 1.12
PEX3P56589 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PEX3P56589 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC22.05■■□□□ 1.12
PEX3P56589 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC22.05■■□□□ 1.12
PEX3P56589 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PEX3P56589 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
PEX3P56589 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
PEX3P56589 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
PEX3P56589 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PEX3P56589 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC22.05■■□□□ 1.12
PEX3P56589 ABHD17AP6-201ENST00000458502 1044 ntBASIC22.05■■□□□ 1.12
PEX3P56589 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC22.05■■□□□ 1.12
PEX3P56589 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC22.05■■□□□ 1.12
PEX3P56589 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC22.05■■□□□ 1.12
PEX3P56589 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC22.05■■□□□ 1.12
PEX3P56589 AC006058.3-201ENST00000606217 1069 ntBASIC22.05■■□□□ 1.12
PEX3P56589 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
PEX3P56589 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
PEX3P56589 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
PEX3P56589 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
PEX3P56589 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC22.05■■□□□ 1.12
PEX3P56589 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PEX3P56589 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PEX3P56589 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PEX3P56589 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC22.04■■□□□ 1.12
PEX3P56589 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
PEX3P56589 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
PEX3P56589 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PEX3P56589 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms