Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC16.06■□□□□ 0.16
PAX9P55771 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC16.06■□□□□ 0.16
PAX9P55771 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PAX9P55771 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PAX9P55771 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
PAX9P55771 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PAX9P55771 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PAX9P55771 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PAX9P55771 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PAX9P55771 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PAX9P55771 AC027682.1-201ENST00000562846 899 ntBASIC16.06■□□□□ 0.16
PAX9P55771 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC16.06■□□□□ 0.16
PAX9P55771 AC120498.10-201ENST00000621827 505 ntBASIC16.06■□□□□ 0.16
PAX9P55771 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC16.06■□□□□ 0.16
PAX9P55771 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PAX9P55771 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PAX9P55771 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC16.06■□□□□ 0.16
PAX9P55771 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PAX9P55771 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC16.06■□□□□ 0.16
PAX9P55771 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PAX9P55771 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
PAX9P55771 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PAX9P55771 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PAX9P55771 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC16.05■□□□□ 0.16
PAX9P55771 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC16.05■□□□□ 0.16
PAX9P55771 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PAX9P55771 AC009237.14-201ENST00000609975 1594 ntBASIC16.05■□□□□ 0.16
PAX9P55771 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PAX9P55771 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PAX9P55771 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PAX9P55771 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PAX9P55771 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC16.05■□□□□ 0.16
PAX9P55771 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PAX9P55771 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC16.05■□□□□ 0.16
PAX9P55771 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC16.05■□□□□ 0.16
PAX9P55771 AC096631.2-201ENST00000436136 790 ntBASIC16.05■□□□□ 0.16
PAX9P55771 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC16.05■□□□□ 0.16
PAX9P55771 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC16.05■□□□□ 0.16
PAX9P55771 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PAX9P55771 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC16.05■□□□□ 0.16
PAX9P55771 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC16.05■□□□□ 0.16
PAX9P55771 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC16.05■□□□□ 0.16
PAX9P55771 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PAX9P55771 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
PAX9P55771 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PAX9P55771 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PAX9P55771 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PAX9P55771 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PAX9P55771 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PAX9P55771 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PAX9P55771 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PAX9P55771 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC16.05■□□□□ 0.16
PAX9P55771 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PAX9P55771 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.04■□□□□ 0.16
PAX9P55771 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC16.04■□□□□ 0.16
PAX9P55771 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC16.04■□□□□ 0.16
PAX9P55771 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC16.04■□□□□ 0.16
PAX9P55771 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PAX9P55771 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
PAX9P55771 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC16.04■□□□□ 0.16
PAX9P55771 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
PAX9P55771 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PAX9P55771 AL138781.2-201ENST00000617896 1843 ntBASIC16.04■□□□□ 0.16
PAX9P55771 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
PAX9P55771 AC091799.1-201ENST00000422823 811 ntBASIC16.04■□□□□ 0.16
PAX9P55771 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC16.04■□□□□ 0.16
PAX9P55771 AC079140.4-201ENST00000507448 529 ntBASIC16.04■□□□□ 0.16
PAX9P55771 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC16.04■□□□□ 0.16
PAX9P55771 SLC7A5P2-201ENST00000553010 536 ntBASIC16.04■□□□□ 0.16
PAX9P55771 MAG-206ENST00000597035 542 ntTSL 4 BASIC16.04■□□□□ 0.16
PAX9P55771 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PAX9P55771 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PAX9P55771 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
PAX9P55771 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
PAX9P55771 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC16.04■□□□□ 0.16
PAX9P55771 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
PAX9P55771 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
PAX9P55771 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
PAX9P55771 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PAX9P55771 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PAX9P55771 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PAX9P55771 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
PAX9P55771 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
PAX9P55771 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PAX9P55771 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PAX9P55771 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
PAX9P55771 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
PAX9P55771 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
PAX9P55771 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PAX9P55771 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PAX9P55771 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC16.03■□□□□ 0.16
PAX9P55771 AC010141.2-201ENST00000452426 721 ntBASIC16.03■□□□□ 0.16
PAX9P55771 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PAX9P55771 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC16.03■□□□□ 0.16
PAX9P55771 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC16.03■□□□□ 0.16
PAX9P55771 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC16.03■□□□□ 0.16
PAX9P55771 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PAX9P55771 AC106739.1-201ENST00000617035 715 ntBASIC16.03■□□□□ 0.16
PAX9P55771 GOLGA2P11-201ENST00000562660 1621 ntBASIC16.03■□□□□ 0.16
PAX9P55771 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms