Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.5■□□□□ 0.87
CDH4P55283 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.5■□□□□ 0.87
CDH4P55283 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CDH4P55283 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDH4P55283 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDH4P55283 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CDH4P55283 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
CDH4P55283 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
CDH4P55283 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDH4P55283 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.49■□□□□ 0.87
CDH4P55283 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CDH4P55283 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDH4P55283 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDH4P55283 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.49■□□□□ 0.87
CDH4P55283 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.49■□□□□ 0.87
CDH4P55283 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.49■□□□□ 0.87
CDH4P55283 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.49■□□□□ 0.87
CDH4P55283 AC233263.1-201ENST00000578059 224 ntBASIC20.49■□□□□ 0.87
CDH4P55283 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
CDH4P55283 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDH4P55283 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CDH4P55283 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.49■□□□□ 0.87
CDH4P55283 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
CDH4P55283 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDH4P55283 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDH4P55283 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDH4P55283 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDH4P55283 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDH4P55283 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDH4P55283 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.48■□□□□ 0.87
CDH4P55283 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDH4P55283 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDH4P55283 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
CDH4P55283 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDH4P55283 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
CDH4P55283 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.48■□□□□ 0.87
CDH4P55283 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.48■□□□□ 0.87
CDH4P55283 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.48■□□□□ 0.87
CDH4P55283 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDH4P55283 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDH4P55283 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDH4P55283 AL512408.1-201ENST00000569378 2000 ntBASIC20.48■□□□□ 0.87
CDH4P55283 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDH4P55283 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDH4P55283 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CDH4P55283 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDH4P55283 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.47■□□□□ 0.87
CDH4P55283 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDH4P55283 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CDH4P55283 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CDH4P55283 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.47■□□□□ 0.87
CDH4P55283 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CDH4P55283 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.47■□□□□ 0.87
CDH4P55283 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.47■□□□□ 0.87
CDH4P55283 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDH4P55283 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CDH4P55283 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.47■□□□□ 0.87
CDH4P55283 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.47■□□□□ 0.87
CDH4P55283 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CDH4P55283 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
CDH4P55283 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDH4P55283 AL162377.1-201ENST00000618844 1793 ntBASIC20.46■□□□□ 0.87
CDH4P55283 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.46■□□□□ 0.87
CDH4P55283 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDH4P55283 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.46■□□□□ 0.87
CDH4P55283 AC124283.5-201ENST00000624661 1809 ntBASIC20.46■□□□□ 0.87
CDH4P55283 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.46■□□□□ 0.87
CDH4P55283 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
CDH4P55283 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CDH4P55283 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CDH4P55283 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDH4P55283 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDH4P55283 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
CDH4P55283 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
CDH4P55283 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CDH4P55283 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.46■□□□□ 0.87
CDH4P55283 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
CDH4P55283 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDH4P55283 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.46■□□□□ 0.87
CDH4P55283 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.46■□□□□ 0.87
CDH4P55283 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CDH4P55283 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.46■□□□□ 0.87
CDH4P55283 RN7SL471P-201ENST00000580476 299 ntBASIC20.46■□□□□ 0.87
CDH4P55283 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.46■□□□□ 0.87
CDH4P55283 AL121829.2-201ENST00000620908 328 ntBASIC20.46■□□□□ 0.87
CDH4P55283 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
CDH4P55283 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDH4P55283 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDH4P55283 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CDH4P55283 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CDH4P55283 BX119927.1-201ENST00000636596 1552 ntBASIC20.46■□□□□ 0.87
CDH4P55283 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
CDH4P55283 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDH4P55283 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDH4P55283 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.45■□□□□ 0.86
CDH4P55283 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.45■□□□□ 0.86
CDH4P55283 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDH4P55283 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDH4P55283 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CDH4P55283 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms