Protein–RNA interactions for Protein: P53866

SQS1, Protein SQS1, yeastyeast

Known RBP Predictions only

Length 767 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SQS1P53866 RAD50YNL250W 3939 nt1.68□□□□□ -2.14
SQS1P53866 IML1YJR138W 4755 nt1.67□□□□□ -2.14
SQS1P53866 YNL284C-BYNL284C-B 5268 nt1.67□□□□□ -2.14
SQS1P53866 TRM732YMR259C 4263 nt1.67□□□□□ -2.14
SQS1P53866 YDL185C-AYDL185C-A 228 nt1.67□□□□□ -2.14
SQS1P53866 OLI1Q0130 231 nt1.67□□□□□ -2.14
SQS1P53866 YGR109W-BYGR109W-B 4644 nt1.67□□□□□ -2.14
SQS1P53866 ISD11YER048W-A 285 nt1.66□□□□□ -2.14
SQS1P53866 YGL007C-AYGL007C-A 87 nt1.66□□□□□ -2.14
SQS1P53866 YOR072W-BYOR072W-B 162 nt1.66□□□□□ -2.14
SQS1P53866 SLX4YLR135W 2247 nt1.66□□□□□ -2.14
SQS1P53866 AHC1YOR023C 1701 nt1.66□□□□□ -2.14
SQS1P53866 POL5YEL055C 3069 nt1.65□□□□□ -2.15
SQS1P53866 Q0032Q0032 291 nt1.63□□□□□ -2.15
SQS1P53866 YLL019W-AYLL019W-A 93 nt1.63□□□□□ -2.15
SQS1P53866 YDL206WYDL206W 2289 nt1.63□□□□□ -2.15
SQS1P53866 snR14snR14 160 nt1.62□□□□□ -2.15
SQS1P53866 NCA2YPR155C 1851 nt1.62□□□□□ -2.15
SQS1P53866 SMC4YLR086W 4257 nt1.62□□□□□ -2.15
SQS1P53866 SLD3YGL113W 2007 nt1.61□□□□□ -2.15
SQS1P53866 YDL196WYDL196W 330 nt1.61□□□□□ -2.15
SQS1P53866 MMS4YBR098W 2076 nt1.61□□□□□ -2.15
SQS1P53866 PIK1YNL267W 3201 nt1.61□□□□□ -2.15
SQS1P53866 IRA1YBR140C 9279 nt1.6□□□□□ -2.15
SQS1P53866 YOR161W-BYOR161W-B 261 nt1.6□□□□□ -2.15
SQS1P53866 YBR131C-AYBR131C-A 90 nt1.6□□□□□ -2.15
SQS1P53866 YOR019WYOR019W 2193 nt1.59□□□□□ -2.15
SQS1P53866 HAL9YOL089C 3093 nt1.59□□□□□ -2.15
SQS1P53866 AIM44YPL158C 2277 nt1.59□□□□□ -2.15
SQS1P53866 tV(UAC)BtV(UAC)B 74 nt1.59□□□□□ -2.15
SQS1P53866 tV(UAC)DtV(UAC)D 74 nt1.59□□□□□ -2.15
SQS1P53866 YLR140WYLR140W 327 nt1.59□□□□□ -2.15
SQS1P53866 YNL198CYNL198C 303 nt1.59□□□□□ -2.15
SQS1P53866 MDS3YGL197W 4464 nt1.59□□□□□ -2.15
SQS1P53866 YDR354C-AYDR354C-A 144 nt1.58□□□□□ -2.16
SQS1P53866 YJL026C-AYJL026C-A 222 nt1.58□□□□□ -2.16
SQS1P53866 BST1YFL025C 3090 nt1.58□□□□□ -2.16
SQS1P53866 YLL054CYLL054C 2532 nt1.58□□□□□ -2.16
SQS1P53866 YEL014CYEL014C 306 nt1.57□□□□□ -2.16
SQS1P53866 ULI1YFR026C 510 nt1.57□□□□□ -2.16
SQS1P53866 YJL182CYJL182C 318 nt1.57□□□□□ -2.16
SQS1P53866 snR46snR46 197 nt1.57□□□□□ -2.16
SQS1P53866 FIG4YNL325C 2640 nt1.56□□□□□ -2.16
SQS1P53866 YAR009CYAR009C 3591 nt1.56□□□□□ -2.16
SQS1P53866 SWI4YER111C 3282 nt1.56□□□□□ -2.16
SQS1P53866 CDC25YLR310C 4770 nt1.56□□□□□ -2.16
SQS1P53866 PET127YOR017W 2403 nt1.56□□□□□ -2.16
SQS1P53866 YJL150WYJL150W 303 nt1.55□□□□□ -2.16
SQS1P53866 YOR345CYOR345C 351 nt1.55□□□□□ -2.16
SQS1P53866 SET3YKR029C 2256 nt1.54□□□□□ -2.16
SQS1P53866 tQ(UUG)E2tQ(UUG)E2 72 nt1.54□□□□□ -2.16
SQS1P53866 YLR466C-BYLR466C-B 117 nt1.54□□□□□ -2.16
SQS1P53866 ROM2YLR371W 4071 nt1.53□□□□□ -2.16
SQS1P53866 FYV8YGR196C 2454 nt1.53□□□□□ -2.16
SQS1P53866 APL3YBL037W 3078 nt1.53□□□□□ -2.16
SQS1P53866 YOL014WYOL014W 375 nt1.52□□□□□ -2.17
SQS1P53866 HKR1YDR420W 5409 nt1.51□□□□□ -2.17
SQS1P53866 EST2YLR318W 2655 nt1.51□□□□□ -2.17
SQS1P53866 RPL33BYOR234C 324 nt1.51□□□□□ -2.17
SQS1P53866 MSN5YDR335W 3675 nt1.51□□□□□ -2.17
SQS1P53866 MEC1YBR136W 7107 nt1.5□□□□□ -2.17
SQS1P53866 STO1YMR125W 2586 nt1.5□□□□□ -2.17
SQS1P53866 YIL134C-AYIL134C-A 204 nt1.5□□□□□ -2.17
SQS1P53866 APL1YJR005W 2103 nt1.5□□□□□ -2.17
SQS1P53866 SEC3YER008C 4011 nt1.49□□□□□ -2.17
SQS1P53866 PAA1YDR071C 576 nt1.49□□□□□ -2.17
SQS1P53866 YAL067W-AYAL067W-A 228 nt1.49□□□□□ -2.17
SQS1P53866 YBR221W-AYBR221W-A 105 nt1.49□□□□□ -2.17
SQS1P53866 PRP39YML046W 1890 nt1.49□□□□□ -2.17
SQS1P53866 YLR342W-AYLR342W-A 174 nt1.48□□□□□ -2.17
SQS1P53866 SIP4YJL089W 2490 nt1.48□□□□□ -2.17
SQS1P53866 NUP188YML103C 4968 nt1.47□□□□□ -2.17
SQS1P53866 YGR151CYGR151C 336 nt1.47□□□□□ -2.17
SQS1P53866 COX12YLR038C 252 nt1.47□□□□□ -2.17
SQS1P53866 COY1YKL179C 2040 nt1.47□□□□□ -2.17
SQS1P53866 SPC110YDR356W 2835 nt1.46□□□□□ -2.18
SQS1P53866 YLR294CYLR294C 330 nt1.46□□□□□ -2.18
SQS1P53866 YNL211CYNL211C 261 nt1.46□□□□□ -2.18
SQS1P53866 AZF1YOR113W 2745 nt1.45□□□□□ -2.18
SQS1P53866 CDC39YCR093W 6327 nt1.43□□□□□ -2.18
SQS1P53866 NUP157YER105C 4176 nt1.42□□□□□ -2.18
SQS1P53866 KAP120YPL125W 3099 nt1.41□□□□□ -2.18
SQS1P53866 WAR1YML076C 2835 nt1.41□□□□□ -2.18
SQS1P53866 NOP9YJL010C 2001 nt1.41□□□□□ -2.18
SQS1P53866 PMP1YCR024C-A 123 nt1.41□□□□□ -2.18
SQS1P53866 CMC4YMR194C-B 222 nt1.41□□□□□ -2.18
SQS1P53866 YBR200W-AYBR200W-A 165 nt1.41□□□□□ -2.18
SQS1P53866 snR52snR52 92 nt1.41□□□□□ -2.18
SQS1P53866 TRS65YGR166W 1683 nt1.41□□□□□ -2.18
SQS1P53866 RSM22YKL155C 1887 nt1.41□□□□□ -2.18
SQS1P53866 EAF1YDR359C 2949 nt1.4□□□□□ -2.18
SQS1P53866 ASE1YOR058C 2658 nt1.4□□□□□ -2.19
SQS1P53866 STB6YKL072W 2301 nt1.4□□□□□ -2.19
SQS1P53866 YLL020CYLL020C 306 nt1.39□□□□□ -2.19
SQS1P53866 DOP1YDR141C 5097 nt1.39□□□□□ -2.19
SQS1P53866 YEL073CYEL073C 324 nt1.38□□□□□ -2.19
SQS1P53866 YIL002W-AYIL002W-A 210 nt1.38□□□□□ -2.19
SQS1P53866 YPL044CYPL044C 549 nt1.37□□□□□ -2.19
SQS1P53866 YCR038W-AYCR038W-A 126 nt1.36□□□□□ -2.19
SQS1P53866 YGL123C-AYGL123C-A 231 nt1.35□□□□□ -2.19
Retrieved 100 of 7,029 protein–RNA pairs in 13.6 ms