Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
LBX1P52954 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
LBX1P52954 AC079776.4-201ENST00000511039 504 ntBASIC22.91■■□□□ 1.26
LBX1P52954 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
LBX1P52954 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC22.91■■□□□ 1.26
LBX1P52954 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC22.91■■□□□ 1.26
LBX1P52954 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC22.91■■□□□ 1.26
LBX1P52954 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC22.91■■□□□ 1.26
LBX1P52954 AL671883.3-201ENST00000603274 991 ntBASIC22.91■■□□□ 1.26
LBX1P52954 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
LBX1P52954 AL031008.1-201ENST00000619963 541 ntBASIC22.91■■□□□ 1.26
LBX1P52954 AC117500.6-201ENST00000624871 588 ntBASIC22.91■■□□□ 1.26
LBX1P52954 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
LBX1P52954 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
LBX1P52954 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
LBX1P52954 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
LBX1P52954 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC22.9■■□□□ 1.26
LBX1P52954 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC22.9■■□□□ 1.26
LBX1P52954 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
LBX1P52954 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
LBX1P52954 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC22.9■■□□□ 1.26
LBX1P52954 SLC25A1P2-201ENST00000430693 912 ntBASIC22.9■■□□□ 1.26
LBX1P52954 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC22.9■■□□□ 1.26
LBX1P52954 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC22.9■■□□□ 1.26
LBX1P52954 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC22.9■■□□□ 1.26
LBX1P52954 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
LBX1P52954 AP000692.2-201ENST00000608391 879 ntBASIC22.9■■□□□ 1.26
LBX1P52954 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC22.9■■□□□ 1.26
LBX1P52954 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
LBX1P52954 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC22.89■■□□□ 1.26
LBX1P52954 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC22.89■■□□□ 1.26
LBX1P52954 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
LBX1P52954 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
LBX1P52954 AC004980.1-204ENST00000429707 299 ntBASIC22.89■■□□□ 1.25
LBX1P52954 AC112907.2-201ENST00000448639 330 ntBASIC22.89■■□□□ 1.25
LBX1P52954 SNX5-210ENST00000481323 562 ntTSL 3 BASIC22.89■■□□□ 1.25
LBX1P52954 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC22.89■■□□□ 1.25
LBX1P52954 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
LBX1P52954 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC22.89■■□□□ 1.25
LBX1P52954 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
LBX1P52954 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.25
LBX1P52954 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
LBX1P52954 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC22.88■■□□□ 1.25
LBX1P52954 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
LBX1P52954 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
LBX1P52954 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
LBX1P52954 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
LBX1P52954 EMBP1-201ENST00000458200 901 ntBASIC22.88■■□□□ 1.25
LBX1P52954 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC22.88■■□□□ 1.25
LBX1P52954 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC22.88■■□□□ 1.25
LBX1P52954 AC104692.2-201ENST00000603054 253 ntBASIC22.88■■□□□ 1.25
LBX1P52954 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC22.88■■□□□ 1.25
LBX1P52954 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
LBX1P52954 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC22.88■■□□□ 1.25
LBX1P52954 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
LBX1P52954 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
LBX1P52954 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
LBX1P52954 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
LBX1P52954 AL160237.2-201ENST00000556165 472 ntBASIC22.87■■□□□ 1.25
LBX1P52954 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC22.87■■□□□ 1.25
LBX1P52954 C1QL1P1-201ENST00000568105 661 ntBASIC22.87■■□□□ 1.25
LBX1P52954 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
LBX1P52954 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC22.87■■□□□ 1.25
LBX1P52954 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
LBX1P52954 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
LBX1P52954 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
LBX1P52954 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC22.86■■□□□ 1.25
LBX1P52954 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC22.86■■□□□ 1.25
LBX1P52954 AC092338.2-201ENST00000568827 1415 ntBASIC22.86■■□□□ 1.25
LBX1P52954 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC22.86■■□□□ 1.25
LBX1P52954 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
LBX1P52954 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
LBX1P52954 MFAP1P1-201ENST00000442257 1255 ntBASIC22.86■■□□□ 1.25
LBX1P52954 IFNL4P1-201ENST00000607083 540 ntBASIC22.86■■□□□ 1.25
LBX1P52954 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC22.86■■□□□ 1.25
LBX1P52954 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
LBX1P52954 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
LBX1P52954 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC22.86■■□□□ 1.25
LBX1P52954 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
LBX1P52954 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
LBX1P52954 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC22.85■■□□□ 1.25
LBX1P52954 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC22.85■■□□□ 1.25
LBX1P52954 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
LBX1P52954 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC22.85■■□□□ 1.25
LBX1P52954 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC22.85■■□□□ 1.25
LBX1P52954 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC22.85■■□□□ 1.25
LBX1P52954 AL512604.3-201ENST00000569583 964 ntBASIC22.85■■□□□ 1.25
LBX1P52954 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
LBX1P52954 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
LBX1P52954 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
LBX1P52954 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
LBX1P52954 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC22.85■■□□□ 1.25
LBX1P52954 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
LBX1P52954 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC22.84■■□□□ 1.25
LBX1P52954 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC22.84■■□□□ 1.25
LBX1P52954 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
LBX1P52954 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC22.84■■□□□ 1.25
LBX1P52954 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
LBX1P52954 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
LBX1P52954 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC22.84■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms