Protein–RNA interactions for Protein: P50944

AVT4, Vacuolar amino acid transporter 4, yeastyeast

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
AVT4P50944 YBR200W-AYBR200W-A 165 nt1.14□□□□□ -2.23
AVT4P50944 SMC1YFL008W 3678 nt1.13□□□□□ -2.23
AVT4P50944 tH(GUG)E1tH(GUG)E1 72 nt1.13□□□□□ -2.23
AVT4P50944 tH(GUG)E2tH(GUG)E2 72 nt1.13□□□□□ -2.23
AVT4P50944 tH(GUG)G1tH(GUG)G1 72 nt1.13□□□□□ -2.23
AVT4P50944 tH(GUG)G2tH(GUG)G2 72 nt1.13□□□□□ -2.23
AVT4P50944 tH(GUG)HtH(GUG)H 72 nt1.13□□□□□ -2.23
AVT4P50944 tH(GUG)KtH(GUG)K 72 nt1.13□□□□□ -2.23
AVT4P50944 tH(GUG)MtH(GUG)M 72 nt1.13□□□□□ -2.23
AVT4P50944 RRT15YLR162W-A 189 nt1.13□□□□□ -2.23
AVT4P50944 WAR1YML076C 2835 nt1.12□□□□□ -2.23
AVT4P50944 NPR2YEL062W 1848 nt1.12□□□□□ -2.23
AVT4P50944 OLI1Q0130 231 nt1.11□□□□□ -2.23
AVT4P50944 YLL019W-AYLL019W-A 93 nt1.11□□□□□ -2.23
AVT4P50944 YBR182C-AYBR182C-A 195 nt1.11□□□□□ -2.23
AVT4P50944 RSM22YKL155C 1887 nt1.11□□□□□ -2.23
AVT4P50944 SEC3YER008C 4011 nt1.11□□□□□ -2.23
AVT4P50944 CLU1YMR012W 3834 nt1.1□□□□□ -2.23
AVT4P50944 RAD9YDR217C 3930 nt1.1□□□□□ -2.23
AVT4P50944 SPG3YDR504C 384 nt1.1□□□□□ -2.23
AVT4P50944 YIR030W-AYIR030W-A 384 nt1.1□□□□□ -2.23
AVT4P50944 YKU70YMR284W 1809 nt1.1□□□□□ -2.23
AVT4P50944 EAF1YDR359C 2949 nt1.09□□□□□ -2.23
AVT4P50944 YDR354C-AYDR354C-A 144 nt1.09□□□□□ -2.23
AVT4P50944 ROM2YLR371W 4071 nt1.08□□□□□ -2.24
AVT4P50944 YGR130CYGR130C 2451 nt1.08□□□□□ -2.24
AVT4P50944 STB6YKL072W 2301 nt1.08□□□□□ -2.24
AVT4P50944 RPL33BYOR234C 324 nt1.08□□□□□ -2.24
AVT4P50944 YJL026C-AYJL026C-A 222 nt1.07□□□□□ -2.24
AVT4P50944 APL1YJR005W 2103 nt1.07□□□□□ -2.24
AVT4P50944 CDC39YCR093W 6327 nt1.06□□□□□ -2.24
AVT4P50944 YDL196WYDL196W 330 nt1.06□□□□□ -2.24
AVT4P50944 ISD11YER048W-A 285 nt1.06□□□□□ -2.24
AVT4P50944 YNL211CYNL211C 261 nt1.06□□□□□ -2.24
AVT4P50944 YOR302WYOR302W 78 nt1.06□□□□□ -2.24
AVT4P50944 NUP157YER105C 4176 nt1.06□□□□□ -2.24
AVT4P50944 LAA1YJL207C 6045 nt1.06□□□□□ -2.24
AVT4P50944 GEA2YEL022W 4380 nt1.05□□□□□ -2.24
AVT4P50944 PAA1YDR071C 576 nt1.05□□□□□ -2.24
AVT4P50944 CMC4YMR194C-B 222 nt1.05□□□□□ -2.24
AVT4P50944 YNL284C-BYNL284C-B 5268 nt1.05□□□□□ -2.24
AVT4P50944 YAL067W-AYAL067W-A 228 nt1.04□□□□□ -2.24
AVT4P50944 JLP2YMR132C 627 nt1.04□□□□□ -2.24
AVT4P50944 NOP9YJL010C 2001 nt1.04□□□□□ -2.24
AVT4P50944 VAM6YDL077C 3150 nt1.03□□□□□ -2.24
AVT4P50944 BLI1YKL061W 342 nt1.03□□□□□ -2.24
AVT4P50944 NST1YNL091W 3723 nt1.03□□□□□ -2.25
AVT4P50944 tM(CAU)Q1tM(CAU)Q1 76 nt1.02□□□□□ -2.25
AVT4P50944 YMR046W-AYMR046W-A 129 nt1.02□□□□□ -2.25
AVT4P50944 YPL044CYPL044C 549 nt1.02□□□□□ -2.25
AVT4P50944 ULI1YFR026C 510 nt1.01□□□□□ -2.25
AVT4P50944 APQ12YIL040W 417 nt1.01□□□□□ -2.25
AVT4P50944 IML1YJR138W 4755 nt1□□□□□ -2.25
AVT4P50944 tV(UAC)BtV(UAC)B 74 nt1□□□□□ -2.25
AVT4P50944 tV(UAC)DtV(UAC)D 74 nt1□□□□□ -2.25
AVT4P50944 YOR345CYOR345C 351 nt0.99□□□□□ -2.25
AVT4P50944 TTI1YKL033W 3117 nt0.98□□□□□ -2.25
AVT4P50944 YDR406W-AYDR406W-A 246 nt0.98□□□□□ -2.25
AVT4P50944 RPL26BYGR034W 384 nt0.98□□□□□ -2.25
AVT4P50944 YBR131C-AYBR131C-A 90 nt0.98□□□□□ -2.25
AVT4P50944 YCR018C-AYCR018C-A 255 nt0.97□□□□□ -2.25
AVT4P50944 RPS30BYOR182C 192 nt0.97□□□□□ -2.25
AVT4P50944 SPT7YBR081C 3999 nt0.97□□□□□ -2.25
AVT4P50944 KAP120YPL125W 3099 nt0.97□□□□□ -2.25
AVT4P50944 SIP4YJL089W 2490 nt0.96□□□□□ -2.26
AVT4P50944 YDL185C-AYDL185C-A 228 nt0.95□□□□□ -2.26
AVT4P50944 YFR012W-AYFR012W-A 87 nt0.95□□□□□ -2.26
AVT4P50944 YNL097C-BYNL097C-B 123 nt0.95□□□□□ -2.26
AVT4P50944 YEL014CYEL014C 306 nt0.94□□□□□ -2.26
AVT4P50944 PAM16YJL104W 450 nt0.94□□□□□ -2.26
AVT4P50944 COX12YLR038C 252 nt0.94□□□□□ -2.26
AVT4P50944 ASE1YOR058C 2658 nt0.94□□□□□ -2.26
AVT4P50944 COY1YKL179C 2040 nt0.94□□□□□ -2.26
AVT4P50944 YGL123C-AYGL123C-A 231 nt0.93□□□□□ -2.26
AVT4P50944 EMT1tM(CAU)D 73 nt0.93□□□□□ -2.26
AVT4P50944 EMT5tM(CAU)J1 73 nt0.93□□□□□ -2.26
AVT4P50944 EMT3tM(CAU)J2 73 nt0.93□□□□□ -2.26
AVT4P50944 EMT4tM(CAU)M 73 nt0.93□□□□□ -2.26
AVT4P50944 EMT2tM(CAU)O2 73 nt0.93□□□□□ -2.26
AVT4P50944 YJR029WYJR029W 5268 nt0.93□□□□□ -2.26
AVT4P50944 YPR137C-BYPR137C-B 5268 nt0.93□□□□□ -2.26
AVT4P50944 HAL9YOL089C 3093 nt0.92□□□□□ -2.26
AVT4P50944 STF2YGR008C 255 nt0.92□□□□□ -2.26
AVT4P50944 YIL134C-AYIL134C-A 204 nt0.92□□□□□ -2.26
AVT4P50944 YKL100W-AYKL100W-A 90 nt0.92□□□□□ -2.26
AVT4P50944 YLR282CYLR282C 342 nt0.92□□□□□ -2.26
AVT4P50944 HUG1YML058W-A 207 nt0.92□□□□□ -2.26
AVT4P50944 BEM2YER155C 6504 nt0.91□□□□□ -2.26
AVT4P50944 COX5BYIL111W 456 nt0.91□□□□□ -2.26
AVT4P50944 snR190snR190 190 nt0.91□□□□□ -2.26
AVT4P50944 YCR038W-AYCR038W-A 126 nt0.9□□□□□ -2.27
AVT4P50944 YOR161W-AYOR161W-A 81 nt0.9□□□□□ -2.27
AVT4P50944 SCC2YDR180W 4482 nt0.89□□□□□ -2.27
AVT4P50944 PMP1YCR024C-A 123 nt0.89□□□□□ -2.27
AVT4P50944 SEC8YPR055W 3198 nt0.89□□□□□ -2.27
AVT4P50944 BFR2YDR299W 1605 nt0.89□□□□□ -2.27
AVT4P50944 DOP1YDR141C 5097 nt0.88□□□□□ -2.27
AVT4P50944 YIL002W-AYIL002W-A 210 nt0.88□□□□□ -2.27
AVT4P50944 YML002WYML002W 2214 nt0.88□□□□□ -2.27
AVT4P50944 PRP16YKR086W 3216 nt0.87□□□□□ -2.27
Retrieved 100 of 7,029 protein–RNA pairs in 18.6 ms