Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF144AP50876 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.59■□□□□ 0.57
RNF144AP50876 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
RNF144AP50876 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF144AP50876 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.59■□□□□ 0.57
RNF144AP50876 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RNF144AP50876 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF144AP50876 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.59■□□□□ 0.57
RNF144AP50876 CYP2T3P-201ENST00000601990 817 ntBASIC18.59■□□□□ 0.57
RNF144AP50876 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF144AP50876 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF144AP50876 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF144AP50876 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.59■□□□□ 0.57
RNF144AP50876 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF144AP50876 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF144AP50876 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.59■□□□□ 0.57
RNF144AP50876 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.59■□□□□ 0.57
RNF144AP50876 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
RNF144AP50876 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RNF144AP50876 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
RNF144AP50876 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RNF144AP50876 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
RNF144AP50876 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RNF144AP50876 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RNF144AP50876 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RNF144AP50876 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
RNF144AP50876 KRT18P68-201ENST00000392293 1000 ntBASIC18.58■□□□□ 0.56
RNF144AP50876 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RNF144AP50876 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RNF144AP50876 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.58■□□□□ 0.56
RNF144AP50876 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
RNF144AP50876 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.58■□□□□ 0.56
RNF144AP50876 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.58■□□□□ 0.56
RNF144AP50876 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RNF144AP50876 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RNF144AP50876 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
RNF144AP50876 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.58■□□□□ 0.56
RNF144AP50876 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
RNF144AP50876 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF144AP50876 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
RNF144AP50876 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RNF144AP50876 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.57■□□□□ 0.56
RNF144AP50876 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
RNF144AP50876 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF144AP50876 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
RNF144AP50876 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.57■□□□□ 0.56
RNF144AP50876 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF144AP50876 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF144AP50876 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF144AP50876 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.57■□□□□ 0.56
RNF144AP50876 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.57■□□□□ 0.56
RNF144AP50876 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.57■□□□□ 0.56
RNF144AP50876 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.57■□□□□ 0.56
RNF144AP50876 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.57■□□□□ 0.56
RNF144AP50876 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RNF144AP50876 AC105020.6-201ENST00000621523 1217 ntBASIC18.57■□□□□ 0.56
RNF144AP50876 OR10C1-204ENST00000622521 1039 ntBASIC18.57■□□□□ 0.56
RNF144AP50876 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF144AP50876 MKRN4P-201ENST00000444706 1521 ntBASIC18.57■□□□□ 0.56
RNF144AP50876 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF144AP50876 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.57■□□□□ 0.56
RNF144AP50876 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF144AP50876 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
RNF144AP50876 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF144AP50876 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
RNF144AP50876 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF144AP50876 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF144AP50876 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
RNF144AP50876 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.56■□□□□ 0.56
RNF144AP50876 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.56■□□□□ 0.56
RNF144AP50876 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
RNF144AP50876 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
RNF144AP50876 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF144AP50876 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF144AP50876 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF144AP50876 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.56■□□□□ 0.56
RNF144AP50876 AF201337.1-201ENST00000520239 748 ntBASIC18.56■□□□□ 0.56
RNF144AP50876 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.56■□□□□ 0.56
RNF144AP50876 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF144AP50876 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.56■□□□□ 0.56
RNF144AP50876 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RNF144AP50876 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.56■□□□□ 0.56
RNF144AP50876 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF144AP50876 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
RNF144AP50876 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF144AP50876 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RNF144AP50876 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF144AP50876 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF144AP50876 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF144AP50876 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.55■□□□□ 0.56
RNF144AP50876 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.55■□□□□ 0.56
RNF144AP50876 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF144AP50876 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.55■□□□□ 0.56
RNF144AP50876 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
RNF144AP50876 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.55■□□□□ 0.56
RNF144AP50876 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.55■□□□□ 0.56
RNF144AP50876 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RNF144AP50876 BX276092.2-201ENST00000417668 665 ntBASIC18.55■□□□□ 0.56
RNF144AP50876 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.55■□□□□ 0.56
RNF144AP50876 PGM5P4-201ENST00000421970 445 ntBASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms