Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CLK1P49759 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.73■□□□□ 0.59
CLK1P49759 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.73■□□□□ 0.59
CLK1P49759 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.73■□□□□ 0.59
CLK1P49759 RARRES2P11-201ENST00000635158 484 ntBASIC18.73■□□□□ 0.59
CLK1P49759 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLK1P49759 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.73■□□□□ 0.59
CLK1P49759 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLK1P49759 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLK1P49759 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLK1P49759 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLK1P49759 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLK1P49759 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLK1P49759 AC020763.4-201ENST00000623414 4170 ntBASIC18.72■□□□□ 0.59
CLK1P49759 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLK1P49759 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLK1P49759 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CLK1P49759 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLK1P49759 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.72■□□□□ 0.59
CLK1P49759 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.72■□□□□ 0.59
CLK1P49759 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.72■□□□□ 0.59
CLK1P49759 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.72■□□□□ 0.59
CLK1P49759 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLK1P49759 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
CLK1P49759 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CLK1P49759 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.72■□□□□ 0.59
CLK1P49759 RBM17P2-201ENST00000616397 1405 ntBASIC18.72■□□□□ 0.59
CLK1P49759 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
CLK1P49759 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLK1P49759 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CLK1P49759 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
CLK1P49759 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLK1P49759 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLK1P49759 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLK1P49759 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLK1P49759 AL158211.5-201ENST00000623583 2518 ntBASIC18.71■□□□□ 0.59
CLK1P49759 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLK1P49759 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLK1P49759 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLK1P49759 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLK1P49759 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CLK1P49759 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CLK1P49759 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLK1P49759 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLK1P49759 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLK1P49759 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLK1P49759 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.71■□□□□ 0.59
CLK1P49759 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.71■□□□□ 0.59
CLK1P49759 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.71■□□□□ 0.59
CLK1P49759 AC022517.1-201ENST00000592429 346 ntBASIC18.71■□□□□ 0.59
CLK1P49759 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLK1P49759 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CLK1P49759 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.71■□□□□ 0.59
CLK1P49759 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLK1P49759 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLK1P49759 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLK1P49759 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLK1P49759 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
CLK1P49759 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLK1P49759 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
CLK1P49759 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CLK1P49759 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLK1P49759 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.7■□□□□ 0.58
CLK1P49759 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLK1P49759 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CLK1P49759 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLK1P49759 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLK1P49759 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.7■□□□□ 0.58
CLK1P49759 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLK1P49759 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.7■□□□□ 0.58
CLK1P49759 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.7■□□□□ 0.58
CLK1P49759 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.7■□□□□ 0.58
CLK1P49759 AC098818.2-201ENST00000564925 2320 ntBASIC18.7■□□□□ 0.58
CLK1P49759 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.7■□□□□ 0.58
CLK1P49759 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
CLK1P49759 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLK1P49759 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.7■□□□□ 0.58
CLK1P49759 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.7■□□□□ 0.58
CLK1P49759 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.7■□□□□ 0.58
CLK1P49759 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLK1P49759 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLK1P49759 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLK1P49759 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CLK1P49759 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLK1P49759 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLK1P49759 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLK1P49759 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CLK1P49759 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.69■□□□□ 0.58
CLK1P49759 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.69■□□□□ 0.58
CLK1P49759 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.69■□□□□ 0.58
CLK1P49759 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.69■□□□□ 0.58
CLK1P49759 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.69■□□□□ 0.58
CLK1P49759 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.69■□□□□ 0.58
CLK1P49759 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CLK1P49759 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLK1P49759 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLK1P49759 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.69■□□□□ 0.58
CLK1P49759 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.69■□□□□ 0.58
CLK1P49759 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CLK1P49759 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms