Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SRP9P49458 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SRP9P49458 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC17.72■□□□□ 0.43
SRP9P49458 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC17.72■□□□□ 0.43
SRP9P49458 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC17.72■□□□□ 0.43
SRP9P49458 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC17.72■□□□□ 0.43
SRP9P49458 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SRP9P49458 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SRP9P49458 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC17.72■□□□□ 0.43
SRP9P49458 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
SRP9P49458 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
SRP9P49458 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.72■□□□□ 0.43
SRP9P49458 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SRP9P49458 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
SRP9P49458 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.72■□□□□ 0.43
SRP9P49458 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SRP9P49458 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SRP9P49458 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
SRP9P49458 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SRP9P49458 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SRP9P49458 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC17.72■□□□□ 0.43
SRP9P49458 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.71■□□□□ 0.43
SRP9P49458 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SRP9P49458 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SRP9P49458 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SRP9P49458 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SRP9P49458 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SRP9P49458 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC17.71■□□□□ 0.43
SRP9P49458 BRI3-207ENST00000539286 699 ntTSL 2 BASIC17.71■□□□□ 0.43
SRP9P49458 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC17.71■□□□□ 0.43
SRP9P49458 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC17.71■□□□□ 0.43
SRP9P49458 IKBKGP1-201ENST00000612193 1073 ntBASIC17.71■□□□□ 0.43
SRP9P49458 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SRP9P49458 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
SRP9P49458 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SRP9P49458 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SRP9P49458 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
SRP9P49458 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SRP9P49458 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SRP9P49458 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.42
SRP9P49458 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.42
SRP9P49458 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
SRP9P49458 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SRP9P49458 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SRP9P49458 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SRP9P49458 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.7■□□□□ 0.42
SRP9P49458 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SRP9P49458 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SRP9P49458 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.7■□□□□ 0.42
SRP9P49458 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SRP9P49458 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
SRP9P49458 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SRP9P49458 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SRP9P49458 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SRP9P49458 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.7■□□□□ 0.42
SRP9P49458 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC17.7■□□□□ 0.42
SRP9P49458 AC011767.1-201ENST00000617410 1153 ntBASIC17.7■□□□□ 0.42
SRP9P49458 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC17.7■□□□□ 0.42
SRP9P49458 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SRP9P49458 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SRP9P49458 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SRP9P49458 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SRP9P49458 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
SRP9P49458 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SRP9P49458 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SRP9P49458 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SRP9P49458 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SRP9P49458 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.69■□□□□ 0.42
SRP9P49458 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SRP9P49458 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
SRP9P49458 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SRP9P49458 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SRP9P49458 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
SRP9P49458 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SRP9P49458 METTL26-203ENST00000397664 604 ntTSL 2 BASIC17.69■□□□□ 0.42
SRP9P49458 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC17.69■□□□□ 0.42
SRP9P49458 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SRP9P49458 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SRP9P49458 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC17.69■□□□□ 0.42
SRP9P49458 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC17.69■□□□□ 0.42
SRP9P49458 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SRP9P49458 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SRP9P49458 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC17.69■□□□□ 0.42
SRP9P49458 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC17.69■□□□□ 0.42
SRP9P49458 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC17.69■□□□□ 0.42
SRP9P49458 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.69■□□□□ 0.42
SRP9P49458 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SRP9P49458 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SRP9P49458 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SRP9P49458 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRP9P49458 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRP9P49458 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.68■□□□□ 0.42
SRP9P49458 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRP9P49458 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.68■□□□□ 0.42
SRP9P49458 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SRP9P49458 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SRP9P49458 AC026471.1-201ENST00000564629 3026 ntBASIC17.68■□□□□ 0.42
SRP9P49458 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
SRP9P49458 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRP9P49458 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms