Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CX3CR1P49238 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CX3CR1P49238 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC17.58■□□□□ 0.4
CX3CR1P49238 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CX3CR1P49238 AL162430.1-201ENST00000480705 870 ntBASIC17.58■□□□□ 0.4
CX3CR1P49238 BID-214ENST00000617586 542 ntTSL 5 BASIC17.58■□□□□ 0.4
CX3CR1P49238 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
CX3CR1P49238 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CX3CR1P49238 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CX3CR1P49238 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
CX3CR1P49238 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.58■□□□□ 0.4
CX3CR1P49238 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CX3CR1P49238 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
CX3CR1P49238 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CX3CR1P49238 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CX3CR1P49238 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CX3CR1P49238 AC068338.2-201ENST00000563278 1430 ntBASIC17.57■□□□□ 0.4
CX3CR1P49238 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CX3CR1P49238 ME3-201ENST00000323418 1068 ntTSL 5 BASIC17.57■□□□□ 0.4
CX3CR1P49238 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.57■□□□□ 0.4
CX3CR1P49238 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC17.57■□□□□ 0.4
CX3CR1P49238 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CX3CR1P49238 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC17.57■□□□□ 0.4
CX3CR1P49238 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CX3CR1P49238 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CX3CR1P49238 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CX3CR1P49238 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CX3CR1P49238 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CX3CR1P49238 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CX3CR1P49238 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CX3CR1P49238 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CX3CR1P49238 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CX3CR1P49238 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CX3CR1P49238 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CX3CR1P49238 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.56■□□□□ 0.4
CX3CR1P49238 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC17.56■□□□□ 0.4
CX3CR1P49238 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CX3CR1P49238 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CX3CR1P49238 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CX3CR1P49238 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CX3CR1P49238 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CX3CR1P49238 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CX3CR1P49238 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CX3CR1P49238 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CX3CR1P49238 MCRIP2P1-201ENST00000394346 511 ntBASIC17.56■□□□□ 0.4
CX3CR1P49238 CYP2T1P-201ENST00000432607 1285 ntBASIC17.56■□□□□ 0.4
CX3CR1P49238 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC17.56■□□□□ 0.4
CX3CR1P49238 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC17.56■□□□□ 0.4
CX3CR1P49238 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CX3CR1P49238 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CX3CR1P49238 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CX3CR1P49238 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
CX3CR1P49238 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CX3CR1P49238 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CX3CR1P49238 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.56■□□□□ 0.4
CX3CR1P49238 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CX3CR1P49238 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CX3CR1P49238 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
CX3CR1P49238 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CX3CR1P49238 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CX3CR1P49238 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.55■□□□□ 0.4
CX3CR1P49238 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CX3CR1P49238 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CX3CR1P49238 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.55■□□□□ 0.4
CX3CR1P49238 AIRN-201ENST00000601203 4374 ntBASIC17.55■□□□□ 0.4
CX3CR1P49238 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.55■□□□□ 0.4
CX3CR1P49238 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CX3CR1P49238 BX119927.1-201ENST00000636596 1552 ntBASIC17.55■□□□□ 0.4
CX3CR1P49238 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CX3CR1P49238 BET1L-204ENST00000410108 637 ntTSL 3 BASIC17.55■□□□□ 0.4
CX3CR1P49238 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.55■□□□□ 0.4
CX3CR1P49238 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC17.55■□□□□ 0.4
CX3CR1P49238 AC069236.1-201ENST00000604339 616 ntBASIC17.55■□□□□ 0.4
CX3CR1P49238 AC100791.3-201ENST00000617619 330 ntBASIC17.55■□□□□ 0.4
CX3CR1P49238 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CX3CR1P49238 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CX3CR1P49238 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.55■□□□□ 0.4
CX3CR1P49238 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CX3CR1P49238 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CX3CR1P49238 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CX3CR1P49238 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CX3CR1P49238 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
CX3CR1P49238 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CX3CR1P49238 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CX3CR1P49238 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CX3CR1P49238 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CX3CR1P49238 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.54■□□□□ 0.4
CX3CR1P49238 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CX3CR1P49238 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CX3CR1P49238 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.54■□□□□ 0.4
CX3CR1P49238 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CX3CR1P49238 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC17.54■□□□□ 0.4
CX3CR1P49238 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC17.54■□□□□ 0.4
CX3CR1P49238 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC17.54■□□□□ 0.4
CX3CR1P49238 AC231657.2-201ENST00000624556 255 ntBASIC17.54■□□□□ 0.4
CX3CR1P49238 AC008694.1-202ENST00000636953 945 ntBASIC17.54■□□□□ 0.4
CX3CR1P49238 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.54■□□□□ 0.4
CX3CR1P49238 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CX3CR1P49238 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CX3CR1P49238 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms