Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SLC6A12P48065 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.36■□□□□ 0.69
SLC6A12P48065 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC6A12P48065 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC6A12P48065 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SLC6A12P48065 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC6A12P48065 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
SLC6A12P48065 AC125437.2-201ENST00000625180 2167 ntBASIC19.36■□□□□ 0.69
SLC6A12P48065 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.36■□□□□ 0.69
SLC6A12P48065 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.35■□□□□ 0.69
SLC6A12P48065 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.35■□□□□ 0.69
SLC6A12P48065 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC6A12P48065 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.35■□□□□ 0.69
SLC6A12P48065 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC6A12P48065 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC6A12P48065 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC6A12P48065 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SLC6A12P48065 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.35■□□□□ 0.69
SLC6A12P48065 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.35■□□□□ 0.69
SLC6A12P48065 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.35■□□□□ 0.69
SLC6A12P48065 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.35■□□□□ 0.69
SLC6A12P48065 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.35■□□□□ 0.69
SLC6A12P48065 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.35■□□□□ 0.69
SLC6A12P48065 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC6A12P48065 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.35■□□□□ 0.69
SLC6A12P48065 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.35■□□□□ 0.69
SLC6A12P48065 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
SLC6A12P48065 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC6A12P48065 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC6A12P48065 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SLC6A12P48065 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC6A12P48065 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
SLC6A12P48065 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC6A12P48065 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SLC6A12P48065 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC6A12P48065 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
SLC6A12P48065 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC6A12P48065 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.34■□□□□ 0.69
SLC6A12P48065 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC6A12P48065 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.34■□□□□ 0.69
SLC6A12P48065 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SLC6A12P48065 DUSP5P2-201ENST00000426873 1033 ntBASIC19.34■□□□□ 0.69
SLC6A12P48065 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SLC6A12P48065 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
SLC6A12P48065 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.34■□□□□ 0.69
SLC6A12P48065 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.34■□□□□ 0.69
SLC6A12P48065 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
SLC6A12P48065 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.34■□□□□ 0.69
SLC6A12P48065 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC6A12P48065 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC6A12P48065 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
SLC6A12P48065 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.34■□□□□ 0.69
SLC6A12P48065 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC6A12P48065 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC6A12P48065 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SLC6A12P48065 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC6A12P48065 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SLC6A12P48065 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC6A12P48065 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC6A12P48065 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC6A12P48065 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC6A12P48065 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.33■□□□□ 0.69
SLC6A12P48065 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.33■□□□□ 0.69
SLC6A12P48065 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.33■□□□□ 0.69
SLC6A12P48065 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
SLC6A12P48065 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SLC6A12P48065 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
SLC6A12P48065 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SLC6A12P48065 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SLC6A12P48065 SLC29A4P1-201ENST00000398760 971 ntBASIC19.33■□□□□ 0.68
SLC6A12P48065 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.33■□□□□ 0.68
SLC6A12P48065 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.33■□□□□ 0.68
SLC6A12P48065 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.33■□□□□ 0.68
SLC6A12P48065 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.33■□□□□ 0.68
SLC6A12P48065 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SLC6A12P48065 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
SLC6A12P48065 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.33■□□□□ 0.68
SLC6A12P48065 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
SLC6A12P48065 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.33■□□□□ 0.68
SLC6A12P48065 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.33■□□□□ 0.68
SLC6A12P48065 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SLC6A12P48065 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SLC6A12P48065 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.33■□□□□ 0.68
SLC6A12P48065 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.33■□□□□ 0.68
SLC6A12P48065 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.32■□□□□ 0.68
SLC6A12P48065 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.32■□□□□ 0.68
SLC6A12P48065 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
SLC6A12P48065 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SLC6A12P48065 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
SLC6A12P48065 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SLC6A12P48065 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.32■□□□□ 0.68
SLC6A12P48065 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC6A12P48065 AC091874.3-201ENST00000512672 1195 ntBASIC19.32■□□□□ 0.68
SLC6A12P48065 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.32■□□□□ 0.68
SLC6A12P48065 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.32■□□□□ 0.68
SLC6A12P48065 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.32■□□□□ 0.68
SLC6A12P48065 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC6A12P48065 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
SLC6A12P48065 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC6A12P48065 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms