Protein–RNA interactions for Protein: P47100

TY1B-JR2, Transposon Ty1-JR2 Gag-Pol polyprotein, yeastyeast

Known RBP Predictions only

Length 1,755 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-JR2P47100 YGL239CYGL239C 315 nt-1.03□□□□□ -2.58
TY1B-JR2P47100 TAR1YLR154W-C 375 nt-1.03□□□□□ -2.58
TY1B-JR2P47100 YCR018C-AYCR018C-A 255 nt-1.04□□□□□ -2.58
TY1B-JR2P47100 YDL185C-AYDL185C-A 228 nt-1.04□□□□□ -2.58
TY1B-JR2P47100 BUD26YDR241W 288 nt-1.04□□□□□ -2.58
TY1B-JR2P47100 EST1YLR233C 2100 nt-1.04□□□□□ -2.58
TY1B-JR2P47100 YIL002W-AYIL002W-A 210 nt-1.05□□□□□ -2.58
TY1B-JR2P47100 BER1YLR412W 825 nt-1.05□□□□□ -2.58
TY1B-JR2P47100 YIL066W-AYIL066W-A 444 nt-1.06□□□□□ -2.58
TY1B-JR2P47100 YJL020W-AYJL020W-A 258 nt-1.06□□□□□ -2.58
TY1B-JR2P47100 YBL107W-AYBL107W-A 105 nt-1.06□□□□□ -2.58
TY1B-JR2P47100 YMR158W-BYMR158W-B 321 nt-1.08□□□□□ -2.58
TY1B-JR2P47100 YDL007C-AYDL007C-A 258 nt-1.08□□□□□ -2.58
TY1B-JR2P47100 YML100W-AYML100W-A 174 nt-1.08□□□□□ -2.58
TY1B-JR2P47100 SNU13YEL026W 381 nt-1.09□□□□□ -2.58
TY1B-JR2P47100 IRC13YOR235W 315 nt-1.09□□□□□ -2.58
TY1B-JR2P47100 YMR013C-AYMR013C-A 150 nt-1.1□□□□□ -2.59
TY1B-JR2P47100 YGL015CYGL015C 393 nt-1.11□□□□□ -2.59
TY1B-JR2P47100 APQ12YIL040W 417 nt-1.11□□□□□ -2.59
TY1B-JR2P47100 snR34snR34 203 nt-1.11□□□□□ -2.59
TY1B-JR2P47100 snR5snR5 204 nt-1.13□□□□□ -2.59
TY1B-JR2P47100 YIL032CYIL032C 357 nt-1.13□□□□□ -2.59
TY1B-JR2P47100 YLR041WYLR041W 321 nt-1.13□□□□□ -2.59
TY1B-JR2P47100 YLR282CYLR282C 342 nt-1.13□□□□□ -2.59
TY1B-JR2P47100 YDR220CYDR220C 294 nt-1.14□□□□□ -2.59
TY1B-JR2P47100 SDH7YDR511W 402 nt-1.14□□□□□ -2.59
TY1B-JR2P47100 HUR1YGL168W 333 nt-1.14□□□□□ -2.59
TY1B-JR2P47100 YMR254CYMR254C 309 nt-1.14□□□□□ -2.59
TY1B-JR2P47100 YOR015WYOR015W 360 nt-1.14□□□□□ -2.59
TY1B-JR2P47100 POP7YBR167C 423 nt-1.14□□□□□ -2.59
TY1B-JR2P47100 HMLALPHA2YCL067C 633 nt-1.15□□□□□ -2.59
TY1B-JR2P47100 MATALPHA2YCR039C 633 nt-1.15□□□□□ -2.59
TY1B-JR2P47100 HMRA2YCR096C 360 nt-1.15□□□□□ -2.59
TY1B-JR2P47100 YCR100CYCR100C 951 nt-1.15□□□□□ -2.59
TY1B-JR2P47100 snR72snR72 98 nt-1.15□□□□□ -2.59
TY1B-JR2P47100 AGA2YGL032C 264 nt-1.15□□□□□ -2.59
TY1B-JR2P47100 YPT6YLR262C 648 nt-1.15□□□□□ -2.59
TY1B-JR2P47100 ATG16YMR159C 453 nt-1.15□□□□□ -2.59
TY1B-JR2P47100 YPR010C-AYPR010C-A 219 nt-1.15□□□□□ -2.59
TY1B-JR2P47100 YGL182CYGL182C 324 nt-1.16□□□□□ -2.59
TY1B-JR2P47100 MRPL32YCR003W 552 nt-1.17□□□□□ -2.6
TY1B-JR2P47100 YPL182CYPL182C 384 nt-1.17□□□□□ -2.6
TY1B-JR2P47100 YLR154W-FYLR154W-F 141 nt-1.19□□□□□ -2.6
TY1B-JR2P47100 YBR072C-AYBR072C-A 162 nt-1.19□□□□□ -2.6
TY1B-JR2P47100 YPR092WYPR092W 306 nt-1.19□□□□□ -2.6
TY1B-JR2P47100 BLI1YKL061W 342 nt-1.2□□□□□ -2.6
TY1B-JR2P47100 SGF11YPL047W 300 nt-1.21□□□□□ -2.6
TY1B-JR2P47100 YPR039WYPR039W 336 nt-1.21□□□□□ -2.6
TY1B-JR2P47100 APQ13YJL075C 417 nt-1.22□□□□□ -2.6
TY1B-JR2P47100 YER084W-AYER084W-A 513 nt-1.23□□□□□ -2.61
TY1B-JR2P47100 YGR270C-AYGR270C-A 219 nt-1.23□□□□□ -2.61
TY1B-JR2P47100 YHR130CYHR130C 336 nt-1.23□□□□□ -2.61
TY1B-JR2P47100 YLR334CYLR334C 381 nt-1.23□□□□□ -2.61
TY1B-JR2P47100 YNL058CYNL058C 951 nt-1.23□□□□□ -2.61
TY1B-JR2P47100 YGL230CYGL230C 444 nt-1.25□□□□□ -2.61
TY1B-JR2P47100 YDL011CYDL011C 324 nt-1.26□□□□□ -2.61
TY1B-JR2P47100 AIM29YKR074W 468 nt-1.26□□□□□ -2.61
TY1B-JR2P47100 YCR001WYCR001W 315 nt-1.28□□□□□ -2.61
TY1B-JR2P47100 YDR366CYDR366C 399 nt-1.28□□□□□ -2.61
TY1B-JR2P47100 YFL063WYFL063W 456 nt-1.28□□□□□ -2.61
TY1B-JR2P47100 YBL062WYBL062W 381 nt-1.28□□□□□ -2.61
TY1B-JR2P47100 TSC3YBR058C-A 243 nt-1.28□□□□□ -2.61
TY1B-JR2P47100 RPL22BYFL034C-A 369 nt-1.29□□□□□ -2.62
TY1B-JR2P47100 YJL182CYJL182C 318 nt-1.29□□□□□ -2.62
TY1B-JR2P47100 YER135CYER135C 393 nt-1.3□□□□□ -2.62
TY1B-JR2P47100 tP(UGG)QtP(UGG)Q 72 nt-1.3□□□□□ -2.62
TY1B-JR2P47100 snR49snR49 165 nt-1.3□□□□□ -2.62
TY1B-JR2P47100 FYV7YLR068W 456 nt-1.31□□□□□ -2.62
TY1B-JR2P47100 YLR264C-AYLR264C-A 117 nt-1.31□□□□□ -2.62
TY1B-JR2P47100 YHR007C-AYHR007C-A 216 nt-1.31□□□□□ -2.62
TY1B-JR2P47100 YER175W-AYER175W-A 165 nt-1.32□□□□□ -2.62
TY1B-JR2P47100 CUP1-1YHR053C 186 nt-1.32□□□□□ -2.62
TY1B-JR2P47100 CUP1-2YHR055C 186 nt-1.32□□□□□ -2.62
TY1B-JR2P47100 YLR217WYLR217W 324 nt-1.32□□□□□ -2.62
TY1B-JR2P47100 SDH6YDR379C-A 240 nt-1.34□□□□□ -2.62
TY1B-JR2P47100 SCEIQ0160 708 nt-1.34□□□□□ -2.62
TY1B-JR2P47100 YGR025WYGR025W 303 nt-1.34□□□□□ -2.62
TY1B-JR2P47100 tY(GUA)QtY(GUA)Q 84 nt-1.35□□□□□ -2.63
TY1B-JR2P47100 YAR029WYAR029W 225 nt-1.35□□□□□ -2.63
TY1B-JR2P47100 YNL303WYNL303W 348 nt-1.35□□□□□ -2.63
TY1B-JR2P47100 ZEO1YOL109W 342 nt-1.35□□□□□ -2.63
TY1B-JR2P47100 YOR192C-CYOR192C-C 237 nt-1.36□□□□□ -2.63
TY1B-JR2P47100 MND1YGL183C 660 nt-1.36□□□□□ -2.63
TY1B-JR2P47100 YPR002C-AYPR002C-A 198 nt-1.38□□□□□ -2.63
TY1B-JR2P47100 snR189snR189 189 nt-1.38□□□□□ -2.63
TY1B-JR2P47100 YKL083WYKL083W 615 nt-1.39□□□□□ -2.63
TY1B-JR2P47100 YKL100W-AYKL100W-A 90 nt-1.39□□□□□ -2.63
TY1B-JR2P47100 YPL068CYPL068C 882 nt-1.39□□□□□ -2.63
TY1B-JR2P47100 YOR161W-AYOR161W-A 81 nt-1.4□□□□□ -2.63
TY1B-JR2P47100 YDR426CYDR426C 378 nt-1.41□□□□□ -2.63
TY1B-JR2P47100 YGL052WYGL052W 306 nt-1.42□□□□□ -2.64
TY1B-JR2P47100 snR9snR9 187 nt-1.44□□□□□ -2.64
TY1B-JR2P47100 YBL071CYBL071C 309 nt-1.45□□□□□ -2.64
TY1B-JR2P47100 YDR354C-AYDR354C-A 144 nt-1.47□□□□□ -2.65
TY1B-JR2P47100 YPL229WYPL229W 621 nt-1.48□□□□□ -2.65
TY1B-JR2P47100 YER053C-AYER053C-A 114 nt-1.49□□□□□ -2.65
TY1B-JR2P47100 YIR021W-AYIR021W-A 213 nt-1.5□□□□□ -2.65
TY1B-JR2P47100 YBR285WYBR285W 435 nt-1.5□□□□□ -2.65
TY1B-JR2P47100 SKI7YOR076C 2244 nt-1.51□□□□□ -2.65
TY1B-JR2P47100 snR81snR81 201 nt-1.51□□□□□ -2.65
Retrieved 100 of 7,029 protein–RNA pairs in 112.8 ms