Protein–RNA interactions for Protein: P47013

LCB3, Dihydrosphingosine 1-phosphate phosphatase LCB3, yeastyeast

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LCB3P47013 MCM10YIL150C 1716 nt0.92□□□□□ -2.26
LCB3P47013 GEA2YEL022W 4380 nt0.92□□□□□ -2.26
LCB3P47013 YEL020C-BYEL020C-B 198 nt0.92□□□□□ -2.26
LCB3P47013 SGF11YPL047W 300 nt0.92□□□□□ -2.26
LCB3P47013 SPT7YBR081C 3999 nt0.91□□□□□ -2.26
LCB3P47013 KAP120YPL125W 3099 nt0.91□□□□□ -2.26
LCB3P47013 ISD11YER048W-A 285 nt0.91□□□□□ -2.26
LCB3P47013 ANS1YHR126C 480 nt0.91□□□□□ -2.26
LCB3P47013 YJL197C-AYJL197C-A 282 nt0.91□□□□□ -2.26
LCB3P47013 YMR172C-AYMR172C-A 384 nt0.91□□□□□ -2.26
LCB3P47013 CMC4YMR194C-B 222 nt0.91□□□□□ -2.26
LCB3P47013 YJR029WYJR029W 5268 nt0.9□□□□□ -2.26
LCB3P47013 YPR137C-BYPR137C-B 5268 nt0.9□□□□□ -2.26
LCB3P47013 NOP9YJL010C 2001 nt0.9□□□□□ -2.27
LCB3P47013 YNL211CYNL211C 261 nt0.9□□□□□ -2.27
LCB3P47013 PAA1YDR071C 576 nt0.89□□□□□ -2.27
LCB3P47013 YGL052WYGL052W 306 nt0.89□□□□□ -2.27
LCB3P47013 YDL196WYDL196W 330 nt0.88□□□□□ -2.27
LCB3P47013 YDR354C-AYDR354C-A 144 nt0.88□□□□□ -2.27
LCB3P47013 YML099W-AYML099W-A 330 nt0.87□□□□□ -2.27
LCB3P47013 YOR282WYOR282W 321 nt0.87□□□□□ -2.27
LCB3P47013 YPL044CYPL044C 549 nt0.87□□□□□ -2.27
LCB3P47013 YPR092WYPR092W 306 nt0.87□□□□□ -2.27
LCB3P47013 DOP1YDR141C 5097 nt0.86□□□□□ -2.27
LCB3P47013 YPL152W-AYPL152W-A 99 nt0.86□□□□□ -2.27
LCB3P47013 SCC2YDR180W 4482 nt0.85□□□□□ -2.27
LCB3P47013 YJL026C-AYJL026C-A 222 nt0.85□□□□□ -2.27
LCB3P47013 TTI1YKL033W 3117 nt0.85□□□□□ -2.27
LCB3P47013 BEM2YER155C 6504 nt0.84□□□□□ -2.27
LCB3P47013 IML1YJR138W 4755 nt0.84□□□□□ -2.27
LCB3P47013 YAL067W-AYAL067W-A 228 nt0.84□□□□□ -2.27
LCB3P47013 YOR072W-BYOR072W-B 162 nt0.84□□□□□ -2.27
LCB3P47013 SIP4YJL089W 2490 nt0.84□□□□□ -2.28
LCB3P47013 EMT1tM(CAU)D 73 nt0.83□□□□□ -2.28
LCB3P47013 EMT5tM(CAU)J1 73 nt0.83□□□□□ -2.28
LCB3P47013 EMT3tM(CAU)J2 73 nt0.83□□□□□ -2.28
LCB3P47013 EMT4tM(CAU)M 73 nt0.83□□□□□ -2.28
LCB3P47013 EMT2tM(CAU)O2 73 nt0.83□□□□□ -2.28
LCB3P47013 YLL019W-AYLL019W-A 93 nt0.83□□□□□ -2.28
LCB3P47013 ASE1YOR058C 2658 nt0.82□□□□□ -2.28
LCB3P47013 PMP1YCR024C-A 123 nt0.82□□□□□ -2.28
LCB3P47013 snR74snR74 88 nt0.82□□□□□ -2.28
LCB3P47013 RPL26BYGR034W 384 nt0.82□□□□□ -2.28
LCB3P47013 BFR2YDR299W 1605 nt0.82□□□□□ -2.28
LCB3P47013 YFR012W-AYFR012W-A 87 nt0.81□□□□□ -2.28
LCB3P47013 YMR307C-AYMR307C-A 195 nt0.81□□□□□ -2.28
LCB3P47013 snR49snR49 165 nt0.81□□□□□ -2.28
LCB3P47013 YPR117WYPR117W 7470 nt0.81□□□□□ -2.28
LCB3P47013 YHR063W-AYHR063W-A 336 nt0.8□□□□□ -2.28
LCB3P47013 tV(UAC)BtV(UAC)B 74 nt0.8□□□□□ -2.28
LCB3P47013 tV(UAC)DtV(UAC)D 74 nt0.8□□□□□ -2.28
LCB3P47013 YGR130CYGR130C 2451 nt0.8□□□□□ -2.28
LCB3P47013 YDL073WYDL073W 2955 nt0.79□□□□□ -2.28
LCB3P47013 tF(GAA)QtF(GAA)Q 75 nt0.79□□□□□ -2.28
LCB3P47013 snR55snR55 98 nt0.78□□□□□ -2.28
LCB3P47013 YDL185C-AYDL185C-A 228 nt0.78□□□□□ -2.28
LCB3P47013 PRP16YKR086W 3216 nt0.78□□□□□ -2.28
LCB3P47013 YIR030W-AYIR030W-A 384 nt0.77□□□□□ -2.29
LCB3P47013 SEC8YPR055W 3198 nt0.76□□□□□ -2.29
LCB3P47013 YCR018C-AYCR018C-A 255 nt0.76□□□□□ -2.29
LCB3P47013 BUD3YCL014W 4911 nt0.75□□□□□ -2.29
LCB3P47013 YCR022CYCR022C 345 nt0.75□□□□□ -2.29
LCB3P47013 YGL188C-AYGL188C-A 141 nt0.75□□□□□ -2.29
LCB3P47013 YOL155W-AYOL155W-A 135 nt0.75□□□□□ -2.29
LCB3P47013 snR190snR190 190 nt0.75□□□□□ -2.29
LCB3P47013 RKR1YMR247C 4689 nt0.74□□□□□ -2.29
LCB3P47013 COY1YKL179C 2040 nt0.74□□□□□ -2.29
LCB3P47013 YLR282CYLR282C 342 nt0.73□□□□□ -2.29
LCB3P47013 YPR160W-AYPR160W-A 81 nt0.73□□□□□ -2.29
LCB3P47013 YBR182C-AYBR182C-A 195 nt0.73□□□□□ -2.29
LCB3P47013 YKU70YMR284W 1809 nt0.73□□□□□ -2.29
LCB3P47013 YGL123C-AYGL123C-A 231 nt0.72□□□□□ -2.29
LCB3P47013 YLR399W-AYLR399W-A 105 nt0.72□□□□□ -2.29
LCB3P47013 ABF2YMR072W 552 nt0.72□□□□□ -2.29
LCB3P47013 NPR2YEL062W 1848 nt0.72□□□□□ -2.29
LCB3P47013 YGL041CYGL041C 204 nt0.71□□□□□ -2.3
LCB3P47013 COX12YLR038C 252 nt0.71□□□□□ -2.3
LCB3P47013 COX5BYIL111W 456 nt0.7□□□□□ -2.3
LCB3P47013 YKL100W-AYKL100W-A 90 nt0.7□□□□□ -2.3
LCB3P47013 PAU24YBR301W 363 nt0.7□□□□□ -2.3
LCB3P47013 CHS6YJL099W 2241 nt0.7□□□□□ -2.3
LCB3P47013 snR8snR8 190 nt0.69□□□□□ -2.3
LCB3P47013 YOR161W-AYOR161W-A 81 nt0.69□□□□□ -2.3
LCB3P47013 RPS30BYOR182C 192 nt0.69□□□□□ -2.3
LCB3P47013 HAL9YOL089C 3093 nt0.68□□□□□ -2.3
LCB3P47013 FYV10YIL097W 1551 nt0.68□□□□□ -2.3
LCB3P47013 YIL134C-AYIL134C-A 204 nt0.68□□□□□ -2.3
LCB3P47013 BLI1YKL061W 342 nt0.68□□□□□ -2.3
LCB3P47013 YML002WYML002W 2214 nt0.68□□□□□ -2.3
LCB3P47013 ULI1YFR026C 510 nt0.67□□□□□ -2.3
LCB3P47013 PRP5YBR237W 2550 nt0.67□□□□□ -2.3
LCB3P47013 YLR041WYLR041W 321 nt0.66□□□□□ -2.3
LCB3P47013 SEC1YDR164C 2175 nt0.66□□□□□ -2.3
LCB3P47013 snR80snR80 171 nt0.65□□□□□ -2.31
LCB3P47013 YDR366CYDR366C 399 nt0.65□□□□□ -2.31
LCB3P47013 YOR345CYOR345C 351 nt0.65□□□□□ -2.31
LCB3P47013 UBP3YER151C 2739 nt0.65□□□□□ -2.31
LCB3P47013 YCR038W-AYCR038W-A 126 nt0.63□□□□□ -2.31
LCB3P47013 OST4YDL232W 111 nt0.63□□□□□ -2.31
LCB3P47013 YER053C-AYER053C-A 114 nt0.63□□□□□ -2.31
Retrieved 100 of 7,029 protein–RNA pairs in 95.5 ms