Protein–RNA interactions for Protein: P43609

RSC8, Chromatin structure-remodeling complex protein RSC8, yeastyeast

Known RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RSC8P43609 CDC31YOR257W 486 nt1.8□□□□□ -2.12
RSC8P43609 YOR019WYOR019W 2193 nt1.79□□□□□ -2.12
RSC8P43609 COY1YKL179C 2040 nt1.79□□□□□ -2.12
RSC8P43609 CCH1YGR217W 6120 nt1.79□□□□□ -2.12
RSC8P43609 UFD2YDL190C 2886 nt1.79□□□□□ -2.12
RSC8P43609 BPH1YCR032W 6504 nt1.78□□□□□ -2.12
RSC8P43609 YGR109W-BYGR109W-B 4644 nt1.78□□□□□ -2.12
RSC8P43609 YNL170WYNL170W 396 nt1.78□□□□□ -2.12
RSC8P43609 YGR130CYGR130C 2451 nt1.78□□□□□ -2.12
RSC8P43609 NUT1YGL151W 3399 nt1.77□□□□□ -2.13
RSC8P43609 HAL9YOL089C 3093 nt1.77□□□□□ -2.13
RSC8P43609 YDR354C-AYDR354C-A 144 nt1.77□□□□□ -2.13
RSC8P43609 YOR161W-BYOR161W-B 261 nt1.77□□□□□ -2.13
RSC8P43609 YLL054CYLL054C 2532 nt1.77□□□□□ -2.13
RSC8P43609 YJL022WYJL022W 309 nt1.76□□□□□ -2.13
RSC8P43609 CAT8YMR280C 4302 nt1.76□□□□□ -2.13
RSC8P43609 MON2YNL297C 4911 nt1.75□□□□□ -2.13
RSC8P43609 SPC110YDR356W 2835 nt1.75□□□□□ -2.13
RSC8P43609 BST1YFL025C 3090 nt1.75□□□□□ -2.13
RSC8P43609 SMC4YLR086W 4257 nt1.74□□□□□ -2.13
RSC8P43609 POL5YEL055C 3069 nt1.73□□□□□ -2.13
RSC8P43609 SLX4YLR135W 2247 nt1.73□□□□□ -2.13
RSC8P43609 KCS1YDR017C 3153 nt1.73□□□□□ -2.13
RSC8P43609 YDL206WYDL206W 2289 nt1.73□□□□□ -2.13
RSC8P43609 SDH6YDR379C-A 240 nt1.72□□□□□ -2.13
RSC8P43609 PAU12YGR294W 363 nt1.72□□□□□ -2.13
RSC8P43609 YJL026C-AYJL026C-A 222 nt1.72□□□□□ -2.13
RSC8P43609 PAU24YBR301W 363 nt1.72□□□□□ -2.13
RSC8P43609 PIK1YNL267W 3201 nt1.72□□□□□ -2.13
RSC8P43609 YGR164WYGR164W 336 nt1.71□□□□□ -2.14
RSC8P43609 IRA1YBR140C 9279 nt1.71□□□□□ -2.14
RSC8P43609 PET127YOR017W 2403 nt1.7□□□□□ -2.14
RSC8P43609 ALY2YJL084C 3141 nt1.7□□□□□ -2.14
RSC8P43609 MDS3YGL197W 4464 nt1.7□□□□□ -2.14
RSC8P43609 PAA1YDR071C 576 nt1.7□□□□□ -2.14
RSC8P43609 FYV8YGR196C 2454 nt1.7□□□□□ -2.14
RSC8P43609 YIL134C-AYIL134C-A 204 nt1.7□□□□□ -2.14
RSC8P43609 RPS30BYOR182C 192 nt1.7□□□□□ -2.14
RSC8P43609 YLR419WYLR419W 4308 nt1.7□□□□□ -2.14
RSC8P43609 BRR2YER172C 6492 nt1.69□□□□□ -2.14
RSC8P43609 APL1YJR005W 2103 nt1.69□□□□□ -2.14
RSC8P43609 MEC1YBR136W 7107 nt1.68□□□□□ -2.14
RSC8P43609 MMS4YBR098W 2076 nt1.68□□□□□ -2.14
RSC8P43609 COX12YLR038C 252 nt1.67□□□□□ -2.14
RSC8P43609 TTI1YKL033W 3117 nt1.66□□□□□ -2.14
RSC8P43609 KAP122YGL016W 3246 nt1.66□□□□□ -2.14
RSC8P43609 PRP42YDR235W 1635 nt1.66□□□□□ -2.14
RSC8P43609 CLU1YMR012W 3834 nt1.66□□□□□ -2.14
RSC8P43609 PAN2YGL094C 3348 nt1.66□□□□□ -2.14
RSC8P43609 YPL044CYPL044C 549 nt1.66□□□□□ -2.14
RSC8P43609 YCR038W-AYCR038W-A 126 nt1.65□□□□□ -2.15
RSC8P43609 YBR221W-AYBR221W-A 105 nt1.65□□□□□ -2.15
RSC8P43609 LAA1YJL207C 6045 nt1.65□□□□□ -2.15
RSC8P43609 YNL211CYNL211C 261 nt1.64□□□□□ -2.15
RSC8P43609 snR14snR14 160 nt1.64□□□□□ -2.15
RSC8P43609 YAL067W-AYAL067W-A 228 nt1.63□□□□□ -2.15
RSC8P43609 YBL053WYBL053W 375 nt1.63□□□□□ -2.15
RSC8P43609 AZF1YOR113W 2745 nt1.63□□□□□ -2.15
RSC8P43609 YCS4YLR272C 3531 nt1.62□□□□□ -2.15
RSC8P43609 SNU13YEL026W 381 nt1.62□□□□□ -2.15
RSC8P43609 tQ(UUG)E2tQ(UUG)E2 72 nt1.62□□□□□ -2.15
RSC8P43609 IML1YJR138W 4755 nt1.62□□□□□ -2.15
RSC8P43609 EST2YLR318W 2655 nt1.62□□□□□ -2.15
RSC8P43609 YAR009CYAR009C 3591 nt1.62□□□□□ -2.15
RSC8P43609 HKR1YDR420W 5409 nt1.61□□□□□ -2.15
RSC8P43609 YIL002W-AYIL002W-A 210 nt1.6□□□□□ -2.15
RSC8P43609 YNL284C-BYNL284C-B 5268 nt1.59□□□□□ -2.16
RSC8P43609 SMC1YFL008W 3678 nt1.59□□□□□ -2.16
RSC8P43609 RSM22YKL155C 1887 nt1.58□□□□□ -2.16
RSC8P43609 YHL015W-AYHL015W-A 84 nt1.58□□□□□ -2.16
RSC8P43609 SWI4YER111C 3282 nt1.56□□□□□ -2.16
RSC8P43609 YOR102WYOR102W 351 nt1.56□□□□□ -2.16
RSC8P43609 YGL123C-AYGL123C-A 231 nt1.55□□□□□ -2.16
RSC8P43609 STO1YMR125W 2586 nt1.55□□□□□ -2.16
RSC8P43609 PRP5YBR237W 2550 nt1.55□□□□□ -2.16
RSC8P43609 SEC21YNL287W 2808 nt1.55□□□□□ -2.16
RSC8P43609 SET3YKR029C 2256 nt1.55□□□□□ -2.16
RSC8P43609 YER053C-AYER053C-A 114 nt1.54□□□□□ -2.16
RSC8P43609 Q0143Q0143 153 nt1.54□□□□□ -2.16
RSC8P43609 YIL020C-AYIL020C-A 339 nt1.54□□□□□ -2.16
RSC8P43609 NUP145YGL092W 3954 nt1.53□□□□□ -2.16
RSC8P43609 MSN5YDR335W 3675 nt1.53□□□□□ -2.16
RSC8P43609 SEC3YER008C 4011 nt1.52□□□□□ -2.17
RSC8P43609 YKL100W-AYKL100W-A 90 nt1.51□□□□□ -2.17
RSC8P43609 CMC4YMR194C-B 222 nt1.51□□□□□ -2.17
RSC8P43609 EAF1YDR359C 2949 nt1.51□□□□□ -2.17
RSC8P43609 NUP188YML103C 4968 nt1.5□□□□□ -2.17
RSC8P43609 tH(GUG)E1tH(GUG)E1 72 nt1.5□□□□□ -2.17
RSC8P43609 tH(GUG)E2tH(GUG)E2 72 nt1.5□□□□□ -2.17
RSC8P43609 tH(GUG)G1tH(GUG)G1 72 nt1.5□□□□□ -2.17
RSC8P43609 tH(GUG)G2tH(GUG)G2 72 nt1.5□□□□□ -2.17
RSC8P43609 tH(GUG)HtH(GUG)H 72 nt1.5□□□□□ -2.17
RSC8P43609 tH(GUG)KtH(GUG)K 72 nt1.5□□□□□ -2.17
RSC8P43609 tH(GUG)MtH(GUG)M 72 nt1.5□□□□□ -2.17
RSC8P43609 YOR161W-AYOR161W-A 81 nt1.5□□□□□ -2.17
RSC8P43609 YOR314W-AYOR314W-A 111 nt1.5□□□□□ -2.17
RSC8P43609 WAR1YML076C 2835 nt1.5□□□□□ -2.17
RSC8P43609 APL3YBL037W 3078 nt1.5□□□□□ -2.17
RSC8P43609 COX5BYIL111W 456 nt1.49□□□□□ -2.17
RSC8P43609 YBR200W-AYBR200W-A 165 nt1.49□□□□□ -2.17
Retrieved 100 of 7,029 protein–RNA pairs in 36.4 ms