Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.4■□□□□ 0.54
SLC1A3P43003 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.4■□□□□ 0.54
SLC1A3P43003 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC1A3P43003 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC1A3P43003 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC1A3P43003 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SLC1A3P43003 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC1A3P43003 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC1A3P43003 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.4■□□□□ 0.54
SLC1A3P43003 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SLC1A3P43003 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC1A3P43003 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.4■□□□□ 0.54
SLC1A3P43003 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.4■□□□□ 0.54
SLC1A3P43003 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.4■□□□□ 0.54
SLC1A3P43003 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.4■□□□□ 0.54
SLC1A3P43003 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.4■□□□□ 0.54
SLC1A3P43003 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC1A3P43003 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SLC1A3P43003 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.4■□□□□ 0.54
SLC1A3P43003 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC1A3P43003 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SLC1A3P43003 SMG8-203ENST00000578922 2178 ntBASIC18.4■□□□□ 0.54
SLC1A3P43003 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
SLC1A3P43003 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
SLC1A3P43003 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SLC1A3P43003 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
SLC1A3P43003 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.39■□□□□ 0.53
SLC1A3P43003 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.39■□□□□ 0.53
SLC1A3P43003 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.39■□□□□ 0.53
SLC1A3P43003 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
SLC1A3P43003 DPP3P2-201ENST00000416030 1696 ntBASIC18.39■□□□□ 0.53
SLC1A3P43003 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC1A3P43003 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SLC1A3P43003 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SLC1A3P43003 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
SLC1A3P43003 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.39■□□□□ 0.53
SLC1A3P43003 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
SLC1A3P43003 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
SLC1A3P43003 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC1A3P43003 RAP2CP1-201ENST00000605103 478 ntBASIC18.39■□□□□ 0.53
SLC1A3P43003 AC105020.6-201ENST00000621523 1217 ntBASIC18.39■□□□□ 0.53
SLC1A3P43003 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.39■□□□□ 0.53
SLC1A3P43003 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.39■□□□□ 0.53
SLC1A3P43003 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC1A3P43003 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SLC1A3P43003 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC1A3P43003 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC1A3P43003 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
SLC1A3P43003 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC1A3P43003 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SLC1A3P43003 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
SLC1A3P43003 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
SLC1A3P43003 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.38■□□□□ 0.53
SLC1A3P43003 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SLC1A3P43003 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC1A3P43003 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SLC1A3P43003 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.38■□□□□ 0.53
SLC1A3P43003 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC1A3P43003 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.38■□□□□ 0.53
SLC1A3P43003 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC1A3P43003 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC1A3P43003 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC1A3P43003 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SLC1A3P43003 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.38■□□□□ 0.53
SLC1A3P43003 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.38■□□□□ 0.53
SLC1A3P43003 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.38■□□□□ 0.53
SLC1A3P43003 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.38■□□□□ 0.53
SLC1A3P43003 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC1A3P43003 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC1A3P43003 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.38■□□□□ 0.53
SLC1A3P43003 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.38■□□□□ 0.53
SLC1A3P43003 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.38■□□□□ 0.53
SLC1A3P43003 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.38■□□□□ 0.53
SLC1A3P43003 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SLC1A3P43003 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC1A3P43003 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SLC1A3P43003 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.37■□□□□ 0.53
SLC1A3P43003 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SLC1A3P43003 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC1A3P43003 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.37■□□□□ 0.53
SLC1A3P43003 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC1A3P43003 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC1A3P43003 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.37■□□□□ 0.53
SLC1A3P43003 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC1A3P43003 AC093787.1-201ENST00000450396 207 ntBASIC18.37■□□□□ 0.53
SLC1A3P43003 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC1A3P43003 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.37■□□□□ 0.53
SLC1A3P43003 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC1A3P43003 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SLC1A3P43003 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.37■□□□□ 0.53
SLC1A3P43003 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SLC1A3P43003 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.37■□□□□ 0.53
SLC1A3P43003 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC1A3P43003 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.37■□□□□ 0.53
SLC1A3P43003 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.36■□□□□ 0.53
SLC1A3P43003 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC1A3P43003 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC1A3P43003 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC1A3P43003 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SLC1A3P43003 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms