Protein–RNA interactions for Protein: P40561

SGN1, RNA-binding protein SGN1, yeastyeast

Known RBP RIP-Chip data

Length 250 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SGN1P40561 tV(UAC)BtV(UAC)B 74 nt1.06□□□□□ -2.24
SGN1P40561 tV(UAC)DtV(UAC)D 74 nt1.06□□□□□ -2.24
SGN1P40561 CMC4YMR194C-B 222 nt1.06□□□□□ -2.24
SGN1P40561 YER181CYER181C 324 nt1.05□□□□□ -2.24
SGN1P40561 YOR231C-AYOR231C-A 201 nt1.05□□□□□ -2.24
SGN1P40561 SGF11YPL047W 300 nt1.05□□□□□ -2.24
SGN1P40561 AHC1YOR023C 1701 nt1.05□□□□□ -2.24
SGN1P40561 KAP120YPL125W 3099 nt1.05□□□□□ -2.24
SGN1P40561 CDC39YCR093W 6327 nt1.04□□□□□ -2.24
SGN1P40561 APL1YJR005W 2103 nt1.04□□□□□ -2.24
SGN1P40561 RPL26BYGR034W 384 nt1.04□□□□□ -2.24
SGN1P40561 YJL197C-AYJL197C-A 282 nt1.04□□□□□ -2.24
SGN1P40561 YLR120W-AYLR120W-A 102 nt1.04□□□□□ -2.24
SGN1P40561 YOR072W-BYOR072W-B 162 nt1.03□□□□□ -2.24
SGN1P40561 GEA2YEL022W 4380 nt1.03□□□□□ -2.25
SGN1P40561 MDS3YGL197W 4464 nt1.03□□□□□ -2.25
SGN1P40561 YGL052WYGL052W 306 nt1.02□□□□□ -2.25
SGN1P40561 SCC2YDR180W 4482 nt1.02□□□□□ -2.25
SGN1P40561 YML099W-AYML099W-A 330 nt1.01□□□□□ -2.25
SGN1P40561 YMR172C-AYMR172C-A 384 nt1□□□□□ -2.25
SGN1P40561 YNL211CYNL211C 261 nt1□□□□□ -2.25
SGN1P40561 RPL33BYOR234C 324 nt1□□□□□ -2.25
SGN1P40561 YPR092WYPR092W 306 nt1□□□□□ -2.25
SGN1P40561 YDL196WYDL196W 330 nt0.99□□□□□ -2.25
SGN1P40561 YAL067W-AYAL067W-A 228 nt0.99□□□□□ -2.25
SGN1P40561 SIP4YJL089W 2490 nt0.99□□□□□ -2.25
SGN1P40561 YEL020C-BYEL020C-B 198 nt0.98□□□□□ -2.25
SGN1P40561 YPR010C-AYPR010C-A 219 nt0.98□□□□□ -2.25
SGN1P40561 YOR015WYOR015W 360 nt0.97□□□□□ -2.25
SGN1P40561 snR49snR49 165 nt0.97□□□□□ -2.25
SGN1P40561 BUD3YCL014W 4911 nt0.97□□□□□ -2.25
SGN1P40561 SPT7YBR081C 3999 nt0.96□□□□□ -2.26
SGN1P40561 YDR354C-AYDR354C-A 144 nt0.96□□□□□ -2.26
SGN1P40561 YPL152W-AYPL152W-A 99 nt0.96□□□□□ -2.26
SGN1P40561 SEC8YPR055W 3198 nt0.96□□□□□ -2.26
SGN1P40561 LTE1YAL024C 4308 nt0.96□□□□□ -2.26
SGN1P40561 YCR018C-AYCR018C-A 255 nt0.95□□□□□ -2.26
SGN1P40561 PMP1YCR024C-A 123 nt0.95□□□□□ -2.26
SGN1P40561 YMR307C-AYMR307C-A 195 nt0.95□□□□□ -2.26
SGN1P40561 TTI1YKL033W 3117 nt0.94□□□□□ -2.26
SGN1P40561 YJL026C-AYJL026C-A 222 nt0.94□□□□□ -2.26
SGN1P40561 YKL100W-AYKL100W-A 90 nt0.94□□□□□ -2.26
SGN1P40561 snR55snR55 98 nt0.93□□□□□ -2.26
SGN1P40561 YLL019W-AYLL019W-A 93 nt0.93□□□□□ -2.26
SGN1P40561 YPR117WYPR117W 7470 nt0.93□□□□□ -2.26
SGN1P40561 PRP16YKR086W 3216 nt0.92□□□□□ -2.26
SGN1P40561 STF2YGR008C 255 nt0.91□□□□□ -2.26
SGN1P40561 YHR063W-AYHR063W-A 336 nt0.91□□□□□ -2.26
SGN1P40561 VAM6YDL077C 3150 nt0.91□□□□□ -2.26
SGN1P40561 YLR399W-AYLR399W-A 105 nt0.9□□□□□ -2.27
SGN1P40561 BFR2YDR299W 1605 nt0.89□□□□□ -2.27
SGN1P40561 BLI1YKL061W 342 nt0.88□□□□□ -2.27
SGN1P40561 YOL155W-AYOL155W-A 135 nt0.88□□□□□ -2.27
SGN1P40561 snR190snR190 190 nt0.88□□□□□ -2.27
SGN1P40561 YCR022CYCR022C 345 nt0.87□□□□□ -2.27
SGN1P40561 YGL188C-AYGL188C-A 141 nt0.87□□□□□ -2.27
SGN1P40561 HUG1YML058W-A 207 nt0.87□□□□□ -2.27
SGN1P40561 YBR182C-AYBR182C-A 195 nt0.86□□□□□ -2.27
SGN1P40561 NPR2YEL062W 1848 nt0.85□□□□□ -2.27
SGN1P40561 YKU70YMR284W 1809 nt0.85□□□□□ -2.27
SGN1P40561 DOP1YDR141C 5097 nt0.85□□□□□ -2.27
SGN1P40561 snR74snR74 88 nt0.85□□□□□ -2.27
SGN1P40561 YIR030W-AYIR030W-A 384 nt0.85□□□□□ -2.27
SGN1P40561 YPR160W-AYPR160W-A 81 nt0.85□□□□□ -2.27
SGN1P40561 ASE1YOR058C 2658 nt0.84□□□□□ -2.27
SGN1P40561 YFR012W-AYFR012W-A 87 nt0.84□□□□□ -2.27
SGN1P40561 YGL123C-AYGL123C-A 231 nt0.84□□□□□ -2.27
SGN1P40561 COX5BYIL111W 456 nt0.84□□□□□ -2.27
SGN1P40561 YLR282CYLR282C 342 nt0.84□□□□□ -2.27
SGN1P40561 YML002WYML002W 2214 nt0.83□□□□□ -2.28
SGN1P40561 YDL185C-AYDL185C-A 228 nt0.83□□□□□ -2.28
SGN1P40561 tF(GAA)QtF(GAA)Q 75 nt0.83□□□□□ -2.28
SGN1P40561 EMT1tM(CAU)D 73 nt0.83□□□□□ -2.28
SGN1P40561 EMT5tM(CAU)J1 73 nt0.83□□□□□ -2.28
SGN1P40561 EMT3tM(CAU)J2 73 nt0.83□□□□□ -2.28
SGN1P40561 EMT4tM(CAU)M 73 nt0.83□□□□□ -2.28
SGN1P40561 EMT2tM(CAU)O2 73 nt0.83□□□□□ -2.28
SGN1P40561 HAL9YOL089C 3093 nt0.82□□□□□ -2.28
SGN1P40561 UBP3YER151C 2739 nt0.82□□□□□ -2.28
SGN1P40561 YDL073WYDL073W 2955 nt0.82□□□□□ -2.28
SGN1P40561 COY1YKL179C 2040 nt0.82□□□□□ -2.28
SGN1P40561 BEM2YER155C 6504 nt0.81□□□□□ -2.28
SGN1P40561 PAM16YJL104W 450 nt0.8□□□□□ -2.28
SGN1P40561 ABF2YMR072W 552 nt0.8□□□□□ -2.28
SGN1P40561 SEC1YDR164C 2175 nt0.8□□□□□ -2.28
SGN1P40561 BEM3YPL115C 3387 nt0.79□□□□□ -2.28
SGN1P40561 snR8snR8 190 nt0.78□□□□□ -2.28
SGN1P40561 CHS6YJL099W 2241 nt0.78□□□□□ -2.28
SGN1P40561 ULI1YFR026C 510 nt0.77□□□□□ -2.29
SGN1P40561 RPS30BYOR182C 192 nt0.77□□□□□ -2.29
SGN1P40561 FYV10YIL097W 1551 nt0.76□□□□□ -2.29
SGN1P40561 COX12YLR038C 252 nt0.75□□□□□ -2.29
SGN1P40561 MLP1YKR095W 5628 nt0.74□□□□□ -2.29
SGN1P40561 YOR161W-AYOR161W-A 81 nt0.74□□□□□ -2.29
SGN1P40561 PRP5YBR237W 2550 nt0.74□□□□□ -2.29
SGN1P40561 YSP1YHR155W 3687 nt0.74□□□□□ -2.29
SGN1P40561 YIL002W-AYIL002W-A 210 nt0.73□□□□□ -2.29
SGN1P40561 YPR159C-AYPR159C-A 102 nt0.73□□□□□ -2.29
SGN1P40561 PAU24YBR301W 363 nt0.73□□□□□ -2.29
SGN1P40561 PRP42YDR235W 1635 nt0.72□□□□□ -2.29
Retrieved 100 of 7,029 protein–RNA pairs in 12.3 ms