Protein–RNA interactions for Protein: P40438

VTH1, VPS10 homolog 1, yeastyeast

Predictions only

Length 1,549 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VTH1P40438 YJL182CYJL182C 318 nt-1.33□□□□□ -2.62
VTH1P40438 YBL107W-AYBL107W-A 105 nt-1.33□□□□□ -2.62
VTH1P40438 AGA2YGL032C 264 nt-1.34□□□□□ -2.62
VTH1P40438 ACF4YJR083C 930 nt-1.34□□□□□ -2.62
VTH1P40438 YGL123C-AYGL123C-A 231 nt-1.35□□□□□ -2.62
VTH1P40438 YGL182CYGL182C 324 nt-1.35□□□□□ -2.62
VTH1P40438 YOR015WYOR015W 360 nt-1.35□□□□□ -2.62
VTH1P40438 SGF11YPL047W 300 nt-1.35□□□□□ -2.62
VTH1P40438 YIL002W-AYIL002W-A 210 nt-1.35□□□□□ -2.63
VTH1P40438 SPC24YMR117C 642 nt-1.35□□□□□ -2.63
VTH1P40438 YOR364WYOR364W 369 nt-1.35□□□□□ -2.63
VTH1P40438 YCR100CYCR100C 951 nt-1.36□□□□□ -2.63
VTH1P40438 YGL239CYGL239C 315 nt-1.36□□□□□ -2.63
VTH1P40438 YLR282CYLR282C 342 nt-1.36□□□□□ -2.63
VTH1P40438 YBR072C-AYBR072C-A 162 nt-1.36□□□□□ -2.63
VTH1P40438 snR51snR51 107 nt-1.36□□□□□ -2.63
VTH1P40438 YER084W-AYER084W-A 513 nt-1.37□□□□□ -2.63
VTH1P40438 tP(UGG)QtP(UGG)Q 72 nt-1.37□□□□□ -2.63
VTH1P40438 YIL066W-AYIL066W-A 444 nt-1.37□□□□□ -2.63
VTH1P40438 RRI2YOL117W 1938 nt-1.38□□□□□ -2.63
VTH1P40438 YIL032CYIL032C 357 nt-1.38□□□□□ -2.63
VTH1P40438 YLR154W-FYLR154W-F 141 nt-1.39□□□□□ -2.63
VTH1P40438 VAM3YOR106W 852 nt-1.4□□□□□ -2.63
VTH1P40438 YJL020W-AYJL020W-A 258 nt-1.4□□□□□ -2.63
VTH1P40438 YOR366WYOR366W 354 nt-1.4□□□□□ -2.63
VTH1P40438 YHR050W-AYHR050W-A 171 nt-1.41□□□□□ -2.64
VTH1P40438 CUP1-1YHR053C 186 nt-1.42□□□□□ -2.64
VTH1P40438 CUP1-2YHR055C 186 nt-1.42□□□□□ -2.64
VTH1P40438 POP7YBR167C 423 nt-1.42□□□□□ -2.64
VTH1P40438 snR57snR57 88 nt-1.43□□□□□ -2.64
VTH1P40438 YHR130CYHR130C 336 nt-1.43□□□□□ -2.64
VTH1P40438 APQ12YIL040W 417 nt-1.43□□□□□ -2.64
VTH1P40438 ILM1YJR118C 612 nt-1.43□□□□□ -2.64
VTH1P40438 YNL146C-AYNL146C-A 195 nt-1.43□□□□□ -2.64
VTH1P40438 YGL015CYGL015C 393 nt-1.44□□□□□ -2.64
VTH1P40438 YLR264C-AYLR264C-A 117 nt-1.44□□□□□ -2.64
VTH1P40438 YOR161W-AYOR161W-A 81 nt-1.45□□□□□ -2.64
VTH1P40438 YDR366CYDR366C 399 nt-1.45□□□□□ -2.64
VTH1P40438 APQ13YJL075C 417 nt-1.45□□□□□ -2.64
VTH1P40438 YPT6YLR262C 648 nt-1.45□□□□□ -2.64
VTH1P40438 YLR163W-AYLR163W-A 114 nt-1.46□□□□□ -2.64
VTH1P40438 YBL062WYBL062W 381 nt-1.46□□□□□ -2.64
VTH1P40438 snR49snR49 165 nt-1.46□□□□□ -2.64
VTH1P40438 YDR220CYDR220C 294 nt-1.47□□□□□ -2.64
VTH1P40438 YMR013C-AYMR013C-A 150 nt-1.47□□□□□ -2.64
VTH1P40438 YPL182CYPL182C 384 nt-1.47□□□□□ -2.64
VTH1P40438 BUD26YDR241W 288 nt-1.48□□□□□ -2.65
VTH1P40438 MND1YGL183C 660 nt-1.48□□□□□ -2.65
VTH1P40438 IRC13YOR235W 315 nt-1.48□□□□□ -2.65
VTH1P40438 HMLALPHA2YCL067C 633 nt-1.49□□□□□ -2.65
VTH1P40438 MATALPHA2YCR039C 633 nt-1.49□□□□□ -2.65
VTH1P40438 HMRA2YCR096C 360 nt-1.49□□□□□ -2.65
VTH1P40438 YNL067W-AYNL067W-A 147 nt-1.49□□□□□ -2.65
VTH1P40438 RPS30AYLR287C-A 192 nt-1.5□□□□□ -2.65
VTH1P40438 ZEO1YOL109W 342 nt-1.5□□□□□ -2.65
VTH1P40438 YOR192C-CYOR192C-C 237 nt-1.5□□□□□ -2.65
VTH1P40438 YNL058CYNL058C 951 nt-1.5□□□□□ -2.65
VTH1P40438 YGL230CYGL230C 444 nt-1.51□□□□□ -2.65
VTH1P40438 AIM29YKR074W 468 nt-1.51□□□□□ -2.65
VTH1P40438 YCR001WYCR001W 315 nt-1.52□□□□□ -2.65
VTH1P40438 MRPL32YCR003W 552 nt-1.53□□□□□ -2.65
VTH1P40438 YER135CYER135C 393 nt-1.53□□□□□ -2.65
VTH1P40438 RPL22BYFL034C-A 369 nt-1.53□□□□□ -2.65
VTH1P40438 SCEIQ0160 708 nt-1.54□□□□□ -2.66
VTH1P40438 tY(GUA)QtY(GUA)Q 84 nt-1.54□□□□□ -2.66
VTH1P40438 FYV7YLR068W 456 nt-1.54□□□□□ -2.66
VTH1P40438 YPR039WYPR039W 336 nt-1.55□□□□□ -2.66
VTH1P40438 SDH6YDR379C-A 240 nt-1.56□□□□□ -2.66
VTH1P40438 snR189snR189 189 nt-1.56□□□□□ -2.66
VTH1P40438 YPR010C-AYPR010C-A 219 nt-1.56□□□□□ -2.66
VTH1P40438 YLR334CYLR334C 381 nt-1.57□□□□□ -2.66
VTH1P40438 YOR170WYOR170W 306 nt-1.57□□□□□ -2.66
VTH1P40438 HUR1YGL168W 333 nt-1.6□□□□□ -2.67
VTH1P40438 YDR354C-AYDR354C-A 144 nt-1.61□□□□□ -2.67
VTH1P40438 YER053C-AYER053C-A 114 nt-1.62□□□□□ -2.67
VTH1P40438 YGL052WYGL052W 306 nt-1.62□□□□□ -2.67
VTH1P40438 SKI7YOR076C 2244 nt-1.63□□□□□ -2.67
VTH1P40438 YKL100W-AYKL100W-A 90 nt-1.65□□□□□ -2.67
VTH1P40438 snR74snR74 88 nt-1.66□□□□□ -2.67
VTH1P40438 SRB7YDR308C 423 nt-1.66□□□□□ -2.67
VTH1P40438 YFL063WYFL063W 456 nt-1.66□□□□□ -2.68
VTH1P40438 YHR007C-AYHR007C-A 216 nt-1.66□□□□□ -2.68
VTH1P40438 YKL083WYKL083W 615 nt-1.66□□□□□ -2.68
VTH1P40438 YNL303WYNL303W 348 nt-1.67□□□□□ -2.68
VTH1P40438 YPR002C-AYPR002C-A 198 nt-1.67□□□□□ -2.68
VTH1P40438 YAR029WYAR029W 225 nt-1.68□□□□□ -2.68
VTH1P40438 YJR087WYJR087W 351 nt-1.69□□□□□ -2.68
VTH1P40438 YFR009W-AYFR009W-A 258 nt-1.71□□□□□ -2.68
VTH1P40438 YGR025WYGR025W 303 nt-1.72□□□□□ -2.69
VTH1P40438 YDL011CYDL011C 324 nt-1.73□□□□□ -2.69
VTH1P40438 PMP2YEL017C-A 132 nt-1.73□□□□□ -2.69
VTH1P40438 ATG16YMR159C 453 nt-1.74□□□□□ -2.69
VTH1P40438 YPL068CYPL068C 882 nt-1.74□□□□□ -2.69
VTH1P40438 YDR426CYDR426C 378 nt-1.75□□□□□ -2.69
VTH1P40438 YEL020C-BYEL020C-B 198 nt-1.77□□□□□ -2.69
VTH1P40438 YPR016W-AYPR016W-A 261 nt-1.77□□□□□ -2.69
VTH1P40438 YLR456WYLR456W 615 nt-1.79□□□□□ -2.7
VTH1P40438 JLP2YMR132C 627 nt-1.79□□□□□ -2.7
VTH1P40438 YHR125WYHR125W 306 nt-1.81□□□□□ -2.7
VTH1P40438 YOL166W-AYOL166W-A 156 nt-1.81□□□□□ -2.7
Retrieved 100 of 7,029 protein–RNA pairs in 40.5 ms