Protein–RNA interactions for Protein: P40414

TPM2, Tropomyosin-2, yeastyeast

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TPM2P40414 MCM10YIL150C 1716 nt1.15□□□□□ -2.23
TPM2P40414 YDR344CYDR344C 444 nt1.14□□□□□ -2.23
TPM2P40414 YDR413CYDR413C 576 nt1.14□□□□□ -2.23
TPM2P40414 YDR524W-CYDR524W-C 90 nt1.14□□□□□ -2.23
TPM2P40414 EMT1tM(CAU)D 73 nt1.14□□□□□ -2.23
TPM2P40414 EMT5tM(CAU)J1 73 nt1.14□□□□□ -2.23
TPM2P40414 EMT3tM(CAU)J2 73 nt1.14□□□□□ -2.23
TPM2P40414 EMT4tM(CAU)M 73 nt1.14□□□□□ -2.23
TPM2P40414 EMT2tM(CAU)O2 73 nt1.14□□□□□ -2.23
TPM2P40414 NHP2YDL208W 471 nt1.13□□□□□ -2.23
TPM2P40414 INA22YIR024C 651 nt1.13□□□□□ -2.23
TPM2P40414 UBP3YER151C 2739 nt1.13□□□□□ -2.23
TPM2P40414 RPL26BYGR034W 384 nt1.12□□□□□ -2.23
TPM2P40414 PMP1YCR024C-A 123 nt1.11□□□□□ -2.23
TPM2P40414 YER097WYER097W 330 nt1.11□□□□□ -2.23
TPM2P40414 SGF11YPL047W 300 nt1.11□□□□□ -2.23
TPM2P40414 STE5YDR103W 2754 nt1.11□□□□□ -2.23
TPM2P40414 YDL073WYDL073W 2955 nt1.11□□□□□ -2.23
TPM2P40414 YPR117WYPR117W 7470 nt1.1□□□□□ -2.23
TPM2P40414 PAM16YJL104W 450 nt1.1□□□□□ -2.23
TPM2P40414 YNL211CYNL211C 261 nt1.1□□□□□ -2.23
TPM2P40414 YJR029WYJR029W 5268 nt1.1□□□□□ -2.23
TPM2P40414 YPR137C-BYPR137C-B 5268 nt1.1□□□□□ -2.23
TPM2P40414 BFR2YDR299W 1605 nt1.07□□□□□ -2.24
TPM2P40414 YNL028WYNL028W 318 nt1.07□□□□□ -2.24
TPM2P40414 PRP16YKR086W 3216 nt1.07□□□□□ -2.24
TPM2P40414 DOP1YDR141C 5097 nt1.04□□□□□ -2.24
TPM2P40414 RPS30BYOR182C 192 nt1.04□□□□□ -2.24
TPM2P40414 YHR063W-AYHR063W-A 336 nt1.03□□□□□ -2.24
TPM2P40414 LTE1YAL024C 4308 nt1.03□□□□□ -2.24
TPM2P40414 SEC8YPR055W 3198 nt1.02□□□□□ -2.25
TPM2P40414 BUD3YCL014W 4911 nt1.02□□□□□ -2.25
TPM2P40414 YAL067W-AYAL067W-A 228 nt1.01□□□□□ -2.25
TPM2P40414 ASE1YOR058C 2658 nt1.01□□□□□ -2.25
TPM2P40414 NPR2YEL062W 1848 nt0.99□□□□□ -2.25
TPM2P40414 PAU24YBR301W 363 nt0.99□□□□□ -2.25
TPM2P40414 YDR354C-AYDR354C-A 144 nt0.97□□□□□ -2.25
TPM2P40414 YJL197C-AYJL197C-A 282 nt0.97□□□□□ -2.25
TPM2P40414 YMR307C-AYMR307C-A 195 nt0.97□□□□□ -2.25
TPM2P40414 SEC1YDR164C 2175 nt0.96□□□□□ -2.26
TPM2P40414 YMR031W-AYMR031W-A 327 nt0.96□□□□□ -2.26
TPM2P40414 YCR018C-AYCR018C-A 255 nt0.95□□□□□ -2.26
TPM2P40414 YFR012W-AYFR012W-A 87 nt0.95□□□□□ -2.26
TPM2P40414 YIL142C-AYIL142C-A 333 nt0.95□□□□□ -2.26
TPM2P40414 YJL026C-AYJL026C-A 222 nt0.95□□□□□ -2.26
TPM2P40414 YLR399W-AYLR399W-A 105 nt0.95□□□□□ -2.26
TPM2P40414 YOR008C-AYOR008C-A 225 nt0.94□□□□□ -2.26
TPM2P40414 CHS6YJL099W 2241 nt0.94□□□□□ -2.26
TPM2P40414 RKR1YMR247C 4689 nt0.94□□□□□ -2.26
TPM2P40414 RAD61YDR014W 1944 nt0.93□□□□□ -2.26
TPM2P40414 YEL020C-BYEL020C-B 198 nt0.93□□□□□ -2.26
TPM2P40414 YPR160W-AYPR160W-A 81 nt0.93□□□□□ -2.26
TPM2P40414 Q0142Q0142 177 nt0.92□□□□□ -2.26
TPM2P40414 YLR120W-AYLR120W-A 102 nt0.92□□□□□ -2.26
TPM2P40414 snR190snR190 190 nt0.92□□□□□ -2.26
TPM2P40414 HAL9YOL089C 3093 nt0.92□□□□□ -2.26
TPM2P40414 YOR072W-BYOR072W-B 162 nt0.9□□□□□ -2.27
TPM2P40414 YDL185C-AYDL185C-A 228 nt0.89□□□□□ -2.27
TPM2P40414 COX5BYIL111W 456 nt0.89□□□□□ -2.27
TPM2P40414 UTP20YBL004W 7482 nt0.89□□□□□ -2.27
TPM2P40414 FYV10YIL097W 1551 nt0.88□□□□□ -2.27
TPM2P40414 YPR159C-AYPR159C-A 102 nt0.88□□□□□ -2.27
TPM2P40414 BEM3YPL115C 3387 nt0.88□□□□□ -2.27
TPM2P40414 YML002WYML002W 2214 nt0.87□□□□□ -2.27
TPM2P40414 snR65snR65 100 nt0.86□□□□□ -2.27
TPM2P40414 tF(GAA)BtF(GAA)B 73 nt0.86□□□□□ -2.27
TPM2P40414 tF(GAA)FtF(GAA)F 73 nt0.86□□□□□ -2.27
TPM2P40414 tF(GAA)GtF(GAA)G 73 nt0.86□□□□□ -2.27
TPM2P40414 tF(GAA)H1tF(GAA)H1 73 nt0.86□□□□□ -2.27
TPM2P40414 tF(GAA)H2tF(GAA)H2 73 nt0.86□□□□□ -2.27
TPM2P40414 tF(GAA)MtF(GAA)M 73 nt0.86□□□□□ -2.27
TPM2P40414 tF(GAA)P1tF(GAA)P1 73 nt0.86□□□□□ -2.27
TPM2P40414 tF(GAA)P2tF(GAA)P2 73 nt0.86□□□□□ -2.27
TPM2P40414 YLL019W-AYLL019W-A 93 nt0.86□□□□□ -2.27
TPM2P40414 YOR015WYOR015W 360 nt0.86□□□□□ -2.27
TPM2P40414 YGR069WYGR069W 336 nt0.85□□□□□ -2.27
TPM2P40414 YKL100W-AYKL100W-A 90 nt0.85□□□□□ -2.27
TPM2P40414 YMR160WYMR160W 2451 nt0.85□□□□□ -2.27
TPM2P40414 YNL146WYNL146W 303 nt0.85□□□□□ -2.27
TPM2P40414 YPR092WYPR092W 306 nt0.85□□□□□ -2.27
TPM2P40414 YLR282CYLR282C 342 nt0.84□□□□□ -2.27
TPM2P40414 YMR172C-AYMR172C-A 384 nt0.84□□□□□ -2.27
TPM2P40414 YNL277W-AYNL277W-A 189 nt0.84□□□□□ -2.27
TPM2P40414 PRP5YBR237W 2550 nt0.83□□□□□ -2.28
TPM2P40414 YGL052WYGL052W 306 nt0.83□□□□□ -2.28
TPM2P40414 YJL127W-AYJL127W-A 117 nt0.81□□□□□ -2.28
TPM2P40414 BLI1YKL061W 342 nt0.81□□□□□ -2.28
TPM2P40414 COY1YKL179C 2040 nt0.81□□□□□ -2.28
TPM2P40414 PAU12YGR294W 363 nt0.8□□□□□ -2.28
TPM2P40414 tT(AGU)BtT(AGU)B 73 nt0.8□□□□□ -2.28
TPM2P40414 tT(AGU)CtT(AGU)C 73 nt0.8□□□□□ -2.28
TPM2P40414 tT(AGU)DtT(AGU)D 73 nt0.8□□□□□ -2.28
TPM2P40414 tT(AGU)HtT(AGU)H 73 nt0.8□□□□□ -2.28
TPM2P40414 tT(AGU)I1tT(AGU)I1 73 nt0.8□□□□□ -2.28
TPM2P40414 tT(AGU)I2tT(AGU)I2 73 nt0.8□□□□□ -2.28
TPM2P40414 tT(AGU)JtT(AGU)J 73 nt0.8□□□□□ -2.28
TPM2P40414 tT(AGU)N1tT(AGU)N1 73 nt0.8□□□□□ -2.28
TPM2P40414 tT(AGU)N2tT(AGU)N2 73 nt0.8□□□□□ -2.28
TPM2P40414 tT(AGU)O1tT(AGU)O1 73 nt0.8□□□□□ -2.28
TPM2P40414 tT(AGU)O2tT(AGU)O2 73 nt0.8□□□□□ -2.28
Retrieved 100 of 7,029 protein–RNA pairs in 60 ms