Protein–RNA interactions for Protein: P39904

VPS52, Vacuolar protein sorting-associated protein 52, yeastyeast

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS52P39904 tH(GUG)HtH(GUG)H 72 nt1.26□□□□□ -2.21
VPS52P39904 tH(GUG)KtH(GUG)K 72 nt1.26□□□□□ -2.21
VPS52P39904 tH(GUG)MtH(GUG)M 72 nt1.26□□□□□ -2.21
VPS52P39904 APQ12YIL040W 417 nt1.26□□□□□ -2.21
VPS52P39904 ECM12YHR021W-A 456 nt1.25□□□□□ -2.21
VPS52P39904 CDC25YLR310C 4770 nt1.24□□□□□ -2.21
VPS52P39904 SWI4YER111C 3282 nt1.24□□□□□ -2.21
VPS52P39904 YAR009CYAR009C 3591 nt1.24□□□□□ -2.21
VPS52P39904 ISD11YER048W-A 285 nt1.24□□□□□ -2.21
VPS52P39904 YLL019W-AYLL019W-A 93 nt1.24□□□□□ -2.21
VPS52P39904 AZF1YOR113W 2745 nt1.24□□□□□ -2.21
VPS52P39904 EST2YLR318W 2655 nt1.23□□□□□ -2.21
VPS52P39904 STO1YMR125W 2586 nt1.23□□□□□ -2.21
VPS52P39904 SET3YKR029C 2256 nt1.23□□□□□ -2.21
VPS52P39904 OLI1Q0130 231 nt1.22□□□□□ -2.21
VPS52P39904 SMC1YFL008W 3678 nt1.21□□□□□ -2.22
VPS52P39904 YBR221W-AYBR221W-A 105 nt1.21□□□□□ -2.22
VPS52P39904 NUP145YGL092W 3954 nt1.21□□□□□ -2.22
VPS52P39904 LAA1YJL207C 6045 nt1.2□□□□□ -2.22
VPS52P39904 YDL196WYDL196W 330 nt1.2□□□□□ -2.22
VPS52P39904 YDR354C-AYDR354C-A 144 nt1.2□□□□□ -2.22
VPS52P39904 PAM16YJL104W 450 nt1.2□□□□□ -2.22
VPS52P39904 APL3YBL037W 3078 nt1.2□□□□□ -2.22
VPS52P39904 RSM22YKL155C 1887 nt1.2□□□□□ -2.22
VPS52P39904 MDS3YGL197W 4464 nt1.2□□□□□ -2.22
VPS52P39904 TRM732YMR259C 4263 nt1.2□□□□□ -2.22
VPS52P39904 NUP188YML103C 4968 nt1.19□□□□□ -2.22
VPS52P39904 ULI1YFR026C 510 nt1.19□□□□□ -2.22
VPS52P39904 YNL337WYNL337W 255 nt1.19□□□□□ -2.22
VPS52P39904 MSN5YDR335W 3675 nt1.19□□□□□ -2.22
VPS52P39904 IML1YJR138W 4755 nt1.18□□□□□ -2.22
VPS52P39904 tV(UAC)BtV(UAC)B 74 nt1.18□□□□□ -2.22
VPS52P39904 tV(UAC)DtV(UAC)D 74 nt1.18□□□□□ -2.22
VPS52P39904 CLU1YMR012W 3834 nt1.18□□□□□ -2.22
VPS52P39904 APL1YJR005W 2103 nt1.18□□□□□ -2.22
VPS52P39904 WAR1YML076C 2835 nt1.17□□□□□ -2.22
VPS52P39904 ROM2YLR371W 4071 nt1.17□□□□□ -2.22
VPS52P39904 YDL185C-AYDL185C-A 228 nt1.17□□□□□ -2.22
VPS52P39904 YEL014CYEL014C 306 nt1.17□□□□□ -2.22
VPS52P39904 YBR200W-AYBR200W-A 165 nt1.17□□□□□ -2.22
VPS52P39904 YLL020CYLL020C 306 nt1.16□□□□□ -2.22
VPS52P39904 YBR131C-AYBR131C-A 90 nt1.16□□□□□ -2.22
VPS52P39904 RAD9YDR217C 3930 nt1.16□□□□□ -2.22
VPS52P39904 EAF1YDR359C 2949 nt1.16□□□□□ -2.22
VPS52P39904 YIL020C-AYIL020C-A 339 nt1.15□□□□□ -2.23
VPS52P39904 YJL026C-AYJL026C-A 222 nt1.15□□□□□ -2.23
VPS52P39904 SEC3YER008C 4011 nt1.14□□□□□ -2.23
VPS52P39904 YCR018C-AYCR018C-A 255 nt1.13□□□□□ -2.23
VPS52P39904 PAA1YDR071C 576 nt1.13□□□□□ -2.23
VPS52P39904 YAL067W-AYAL067W-A 228 nt1.13□□□□□ -2.23
VPS52P39904 YNL097C-BYNL097C-B 123 nt1.13□□□□□ -2.23
VPS52P39904 YNL211CYNL211C 261 nt1.13□□□□□ -2.23
VPS52P39904 YOR345CYOR345C 351 nt1.13□□□□□ -2.23
VPS52P39904 CMC4YMR194C-B 222 nt1.12□□□□□ -2.23
VPS52P39904 RPL33BYOR234C 324 nt1.12□□□□□ -2.23
VPS52P39904 TTI1YKL033W 3117 nt1.11□□□□□ -2.23
VPS52P39904 NOP9YJL010C 2001 nt1.11□□□□□ -2.23
VPS52P39904 SIP4YJL089W 2490 nt1.1□□□□□ -2.23
VPS52P39904 NUP157YER105C 4176 nt1.1□□□□□ -2.23
VPS52P39904 GEA2YEL022W 4380 nt1.09□□□□□ -2.23
VPS52P39904 STB6YKL072W 2301 nt1.09□□□□□ -2.23
VPS52P39904 RPS30BYOR182C 192 nt1.09□□□□□ -2.23
VPS52P39904 YPL044CYPL044C 549 nt1.08□□□□□ -2.24
VPS52P39904 HAL9YOL089C 3093 nt1.08□□□□□ -2.24
VPS52P39904 YNL284C-BYNL284C-B 5268 nt1.07□□□□□ -2.24
VPS52P39904 STF2YGR008C 255 nt1.07□□□□□ -2.24
VPS52P39904 COX12YLR038C 252 nt1.07□□□□□ -2.24
VPS52P39904 RPL26BYGR034W 384 nt1.06□□□□□ -2.24
VPS52P39904 SPT7YBR081C 3999 nt1.05□□□□□ -2.24
VPS52P39904 YIL134C-AYIL134C-A 204 nt1.05□□□□□ -2.24
VPS52P39904 snR46snR46 197 nt1.05□□□□□ -2.24
VPS52P39904 CDC39YCR093W 6327 nt1.05□□□□□ -2.24
VPS52P39904 NST1YNL091W 3723 nt1.04□□□□□ -2.24
VPS52P39904 YGL123C-AYGL123C-A 231 nt1.04□□□□□ -2.24
VPS52P39904 YKL100W-AYKL100W-A 90 nt1.04□□□□□ -2.24
VPS52P39904 snR52snR52 92 nt1.04□□□□□ -2.24
VPS52P39904 COY1YKL179C 2040 nt1.04□□□□□ -2.24
VPS52P39904 VAM6YDL077C 3150 nt1.03□□□□□ -2.24
VPS52P39904 YCR038W-AYCR038W-A 126 nt1.03□□□□□ -2.24
VPS52P39904 HUG1YML058W-A 207 nt1.03□□□□□ -2.24
VPS52P39904 YNL198CYNL198C 303 nt1.03□□□□□ -2.24
VPS52P39904 Q0032Q0032 291 nt1.02□□□□□ -2.25
VPS52P39904 YJL182CYJL182C 318 nt1.02□□□□□ -2.25
VPS52P39904 YLR342W-AYLR342W-A 174 nt1.02□□□□□ -2.25
VPS52P39904 YIL002W-AYIL002W-A 210 nt1.01□□□□□ -2.25
VPS52P39904 YJL150WYJL150W 303 nt1.01□□□□□ -2.25
VPS52P39904 YLR282CYLR282C 342 nt1.01□□□□□ -2.25
VPS52P39904 YLR466C-BYLR466C-B 117 nt1.01□□□□□ -2.25
VPS52P39904 KAP120YPL125W 3099 nt1.01□□□□□ -2.25
VPS52P39904 YEL073CYEL073C 324 nt1□□□□□ -2.25
VPS52P39904 YGL007C-AYGL007C-A 87 nt1□□□□□ -2.25
VPS52P39904 COX5BYIL111W 456 nt1□□□□□ -2.25
VPS52P39904 YFR012W-AYFR012W-A 87 nt0.99□□□□□ -2.25
VPS52P39904 YOR161W-AYOR161W-A 81 nt0.99□□□□□ -2.25
VPS52P39904 snR190snR190 190 nt0.99□□□□□ -2.25
VPS52P39904 ASE1YOR058C 2658 nt0.98□□□□□ -2.25
VPS52P39904 BEM2YER155C 6504 nt0.98□□□□□ -2.25
VPS52P39904 YER053C-AYER053C-A 114 nt0.98□□□□□ -2.25
VPS52P39904 YGR151CYGR151C 336 nt0.98□□□□□ -2.25
VPS52P39904 YML002WYML002W 2214 nt0.97□□□□□ -2.25
Retrieved 100 of 7,029 protein–RNA pairs in 27.7 ms