Protein–RNA interactions for Protein: P39538

UBP12, Ubiquitin carboxyl-terminal hydrolase 12, yeastyeast

Predictions only

Length 1,254 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP12P39538 EAF1YDR359C 2949 nt1.53□□□□□ -2.17
UBP12P39538 MDS3YGL197W 4464 nt1.52□□□□□ -2.17
UBP12P39538 YDR366CYDR366C 399 nt1.52□□□□□ -2.17
UBP12P39538 YPR092WYPR092W 306 nt1.52□□□□□ -2.17
UBP12P39538 PIK1YNL267W 3201 nt1.51□□□□□ -2.17
UBP12P39538 OLI1Q0130 231 nt1.51□□□□□ -2.17
UBP12P39538 YBR064WYBR064W 429 nt1.51□□□□□ -2.17
UBP12P39538 snR55snR55 98 nt1.5□□□□□ -2.17
UBP12P39538 YGL188C-AYGL188C-A 141 nt1.5□□□□□ -2.17
UBP12P39538 YOR072W-BYOR072W-B 162 nt1.5□□□□□ -2.17
UBP12P39538 TTI1YKL033W 3117 nt1.49□□□□□ -2.17
UBP12P39538 snR8snR8 190 nt1.49□□□□□ -2.17
UBP12P39538 YMR307C-AYMR307C-A 195 nt1.49□□□□□ -2.17
UBP12P39538 STB6YKL072W 2301 nt1.49□□□□□ -2.17
UBP12P39538 NUP157YER105C 4176 nt1.48□□□□□ -2.17
UBP12P39538 SGF11YPL047W 300 nt1.48□□□□□ -2.17
UBP12P39538 AHC1YOR023C 1701 nt1.48□□□□□ -2.17
UBP12P39538 PAA1YDR071C 576 nt1.47□□□□□ -2.17
UBP12P39538 YOL155W-AYOL155W-A 135 nt1.47□□□□□ -2.17
UBP12P39538 tV(UAC)BtV(UAC)B 74 nt1.45□□□□□ -2.18
UBP12P39538 tV(UAC)DtV(UAC)D 74 nt1.45□□□□□ -2.18
UBP12P39538 RPL33BYOR234C 324 nt1.43□□□□□ -2.18
UBP12P39538 YPL044CYPL044C 549 nt1.43□□□□□ -2.18
UBP12P39538 APL1YJR005W 2103 nt1.43□□□□□ -2.18
UBP12P39538 SIP4YJL089W 2490 nt1.42□□□□□ -2.18
UBP12P39538 YGL041CYGL041C 204 nt1.42□□□□□ -2.18
UBP12P39538 GEA2YEL022W 4380 nt1.41□□□□□ -2.18
UBP12P39538 RAD9YDR217C 3930 nt1.41□□□□□ -2.18
UBP12P39538 NOP9YJL010C 2001 nt1.41□□□□□ -2.18
UBP12P39538 snR80snR80 171 nt1.41□□□□□ -2.18
UBP12P39538 YMR158W-BYMR158W-B 321 nt1.41□□□□□ -2.18
UBP12P39538 CMC4YMR194C-B 222 nt1.41□□□□□ -2.18
UBP12P39538 CDC39YCR093W 6327 nt1.41□□□□□ -2.18
UBP12P39538 YIL020C-AYIL020C-A 339 nt1.4□□□□□ -2.19
UBP12P39538 YLL019W-AYLL019W-A 93 nt1.4□□□□□ -2.19
UBP12P39538 YDR354C-AYDR354C-A 144 nt1.39□□□□□ -2.19
UBP12P39538 ISD11YER048W-A 285 nt1.39□□□□□ -2.19
UBP12P39538 ABF2YMR072W 552 nt1.39□□□□□ -2.19
UBP12P39538 YNL211CYNL211C 261 nt1.39□□□□□ -2.19
UBP12P39538 NST1YNL091W 3723 nt1.37□□□□□ -2.19
UBP12P39538 snR74snR74 88 nt1.37□□□□□ -2.19
UBP12P39538 RPL26BYGR034W 384 nt1.37□□□□□ -2.19
UBP12P39538 YAL067W-AYAL067W-A 228 nt1.37□□□□□ -2.19
UBP12P39538 YBR182C-AYBR182C-A 195 nt1.37□□□□□ -2.19
UBP12P39538 tF(GAA)QtF(GAA)Q 75 nt1.36□□□□□ -2.19
UBP12P39538 YKU70YMR284W 1809 nt1.36□□□□□ -2.19
UBP12P39538 YJL026C-AYJL026C-A 222 nt1.35□□□□□ -2.19
UBP12P39538 NPR2YEL062W 1848 nt1.34□□□□□ -2.19
UBP12P39538 YIR030W-AYIR030W-A 384 nt1.33□□□□□ -2.2
UBP12P39538 YNL284C-BYNL284C-B 5268 nt1.32□□□□□ -2.2
UBP12P39538 YDL196WYDL196W 330 nt1.32□□□□□ -2.2
UBP12P39538 KAP120YPL125W 3099 nt1.32□□□□□ -2.2
UBP12P39538 YCR018C-AYCR018C-A 255 nt1.3□□□□□ -2.2
UBP12P39538 YOR302WYOR302W 78 nt1.28□□□□□ -2.2
UBP12P39538 SPT7YBR081C 3999 nt1.27□□□□□ -2.21
UBP12P39538 YKL100W-AYKL100W-A 90 nt1.27□□□□□ -2.21
UBP12P39538 ULI1YFR026C 510 nt1.26□□□□□ -2.21
UBP12P39538 UBP3YER151C 2739 nt1.26□□□□□ -2.21
UBP12P39538 BEM2YER155C 6504 nt1.25□□□□□ -2.21
UBP12P39538 BLI1YKL061W 342 nt1.24□□□□□ -2.21
UBP12P39538 RPS30BYOR182C 192 nt1.24□□□□□ -2.21
UBP12P39538 SEC8YPR055W 3198 nt1.23□□□□□ -2.21
UBP12P39538 PMP1YCR024C-A 123 nt1.23□□□□□ -2.21
UBP12P39538 JLP2YMR132C 627 nt1.23□□□□□ -2.21
UBP12P39538 SPG3YDR504C 384 nt1.22□□□□□ -2.21
UBP12P39538 YPR117WYPR117W 7470 nt1.22□□□□□ -2.21
UBP12P39538 SCC2YDR180W 4482 nt1.21□□□□□ -2.22
UBP12P39538 snR190snR190 190 nt1.21□□□□□ -2.22
UBP12P39538 YFR012W-AYFR012W-A 87 nt1.2□□□□□ -2.22
UBP12P39538 YGL123C-AYGL123C-A 231 nt1.2□□□□□ -2.22
UBP12P39538 YLR282CYLR282C 342 nt1.2□□□□□ -2.22
UBP12P39538 YDL185C-AYDL185C-A 228 nt1.19□□□□□ -2.22
UBP12P39538 COX5BYIL111W 456 nt1.19□□□□□ -2.22
UBP12P39538 COY1YKL179C 2040 nt1.19□□□□□ -2.22
UBP12P39538 PRP16YKR086W 3216 nt1.19□□□□□ -2.22
UBP12P39538 VAM6YDL077C 3150 nt1.18□□□□□ -2.22
UBP12P39538 YLR399W-AYLR399W-A 105 nt1.18□□□□□ -2.22
UBP12P39538 ASE1YOR058C 2658 nt1.18□□□□□ -2.22
UBP12P39538 BFR2YDR299W 1605 nt1.18□□□□□ -2.22
UBP12P39538 APQ12YIL040W 417 nt1.17□□□□□ -2.22
UBP12P39538 YBR131C-AYBR131C-A 90 nt1.17□□□□□ -2.22
UBP12P39538 YML002WYML002W 2214 nt1.16□□□□□ -2.22
UBP12P39538 PAM16YJL104W 450 nt1.16□□□□□ -2.22
UBP12P39538 YOR345CYOR345C 351 nt1.16□□□□□ -2.22
UBP12P39538 COX12YLR038C 252 nt1.15□□□□□ -2.23
UBP12P39538 YDL073WYDL073W 2955 nt1.15□□□□□ -2.23
UBP12P39538 YJR029WYJR029W 5268 nt1.15□□□□□ -2.23
UBP12P39538 YPR137C-BYPR137C-B 5268 nt1.15□□□□□ -2.23
UBP12P39538 DOP1YDR141C 5097 nt1.14□□□□□ -2.23
UBP12P39538 YNL097C-BYNL097C-B 123 nt1.14□□□□□ -2.23
UBP12P39538 PAU12YGR294W 363 nt1.13□□□□□ -2.23
UBP12P39538 YMR046W-AYMR046W-A 129 nt1.13□□□□□ -2.23
UBP12P39538 PAU24YBR301W 363 nt1.13□□□□□ -2.23
UBP12P39538 YPR160W-AYPR160W-A 81 nt1.12□□□□□ -2.23
UBP12P39538 tM(CAU)Q1tM(CAU)Q1 76 nt1.11□□□□□ -2.23
UBP12P39538 YIL002W-AYIL002W-A 210 nt1.11□□□□□ -2.23
UBP12P39538 YIL134C-AYIL134C-A 204 nt1.11□□□□□ -2.23
UBP12P39538 YOR161W-AYOR161W-A 81 nt1.11□□□□□ -2.23
UBP12P39538 YEL014CYEL014C 306 nt1.1□□□□□ -2.23
UBP12P39538 HAL9YOL089C 3093 nt1.1□□□□□ -2.23
Retrieved 100 of 7,029 protein–RNA pairs in 27.8 ms