Protein–RNA interactions for Protein: P38907

CHL4, Inner kinetochore subunit CHL4, yeastyeast

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CHL4P38907 EMT1tM(CAU)D 73 nt0.95□□□□□ -2.26
CHL4P38907 EMT5tM(CAU)J1 73 nt0.95□□□□□ -2.26
CHL4P38907 EMT3tM(CAU)J2 73 nt0.95□□□□□ -2.26
CHL4P38907 EMT4tM(CAU)M 73 nt0.95□□□□□ -2.26
CHL4P38907 EMT2tM(CAU)O2 73 nt0.95□□□□□ -2.26
CHL4P38907 YMR321CYMR321C 318 nt0.95□□□□□ -2.26
CHL4P38907 SGF11YPL047W 300 nt0.95□□□□□ -2.26
CHL4P38907 WAR1YML076C 2835 nt0.95□□□□□ -2.26
CHL4P38907 CDC39YCR093W 6327 nt0.94□□□□□ -2.26
CHL4P38907 STB6YKL072W 2301 nt0.94□□□□□ -2.26
CHL4P38907 YEL020C-BYEL020C-B 198 nt0.94□□□□□ -2.26
CHL4P38907 YOR008C-AYOR008C-A 225 nt0.94□□□□□ -2.26
CHL4P38907 IES4YOR189W 351 nt0.94□□□□□ -2.26
CHL4P38907 YLR120W-AYLR120W-A 102 nt0.93□□□□□ -2.26
CHL4P38907 YPL152W-AYPL152W-A 99 nt0.93□□□□□ -2.26
CHL4P38907 YGL052WYGL052W 306 nt0.92□□□□□ -2.26
CHL4P38907 YJL197C-AYJL197C-A 282 nt0.92□□□□□ -2.26
CHL4P38907 BUD3YCL014W 4911 nt0.91□□□□□ -2.26
CHL4P38907 OLI1Q0130 231 nt0.91□□□□□ -2.26
CHL4P38907 YMR172C-AYMR172C-A 384 nt0.91□□□□□ -2.26
CHL4P38907 YPR092WYPR092W 306 nt0.91□□□□□ -2.26
CHL4P38907 MCM10YIL150C 1716 nt0.91□□□□□ -2.26
CHL4P38907 YCS4YLR272C 3531 nt0.91□□□□□ -2.26
CHL4P38907 CLU1YMR012W 3834 nt0.91□□□□□ -2.26
CHL4P38907 YGL041CYGL041C 204 nt0.9□□□□□ -2.27
CHL4P38907 SCC2YDR180W 4482 nt0.9□□□□□ -2.27
CHL4P38907 BEM2YER155C 6504 nt0.9□□□□□ -2.27
CHL4P38907 ROM2YLR371W 4071 nt0.89□□□□□ -2.27
CHL4P38907 YDR354C-AYDR354C-A 144 nt0.89□□□□□ -2.27
CHL4P38907 TTI1YKL033W 3117 nt0.89□□□□□ -2.27
CHL4P38907 snR74snR74 88 nt0.88□□□□□ -2.27
CHL4P38907 YLL019W-AYLL019W-A 93 nt0.88□□□□□ -2.27
CHL4P38907 snR49snR49 165 nt0.88□□□□□ -2.27
CHL4P38907 PAN2YGL094C 3348 nt0.87□□□□□ -2.27
CHL4P38907 YHR063W-AYHR063W-A 336 nt0.87□□□□□ -2.27
CHL4P38907 YNL211CYNL211C 261 nt0.87□□□□□ -2.27
CHL4P38907 DOP1YDR141C 5097 nt0.86□□□□□ -2.27
CHL4P38907 NUP157YER105C 4176 nt0.86□□□□□ -2.27
CHL4P38907 snR55snR55 98 nt0.85□□□□□ -2.27
CHL4P38907 YGL188C-AYGL188C-A 141 nt0.85□□□□□ -2.27
CHL4P38907 YMR307C-AYMR307C-A 195 nt0.85□□□□□ -2.27
CHL4P38907 snR8snR8 190 nt0.84□□□□□ -2.27
CHL4P38907 CMC4YMR194C-B 222 nt0.84□□□□□ -2.27
CHL4P38907 YOL155W-AYOL155W-A 135 nt0.84□□□□□ -2.27
CHL4P38907 YOR072W-BYOR072W-B 162 nt0.84□□□□□ -2.27
CHL4P38907 snR80snR80 171 nt0.83□□□□□ -2.28
CHL4P38907 YDR366CYDR366C 399 nt0.83□□□□□ -2.28
CHL4P38907 YFR012W-AYFR012W-A 87 nt0.82□□□□□ -2.28
CHL4P38907 PAU24YBR301W 363 nt0.82□□□□□ -2.28
CHL4P38907 NOP9YJL010C 2001 nt0.81□□□□□ -2.28
CHL4P38907 ABF2YMR072W 552 nt0.81□□□□□ -2.28
CHL4P38907 YDL196WYDL196W 330 nt0.8□□□□□ -2.28
CHL4P38907 tF(GAA)QtF(GAA)Q 75 nt0.8□□□□□ -2.28
CHL4P38907 NPR2YEL062W 1848 nt0.8□□□□□ -2.28
CHL4P38907 UBP3YER151C 2739 nt0.8□□□□□ -2.28
CHL4P38907 ISD11YER048W-A 285 nt0.79□□□□□ -2.28
CHL4P38907 YPL044CYPL044C 549 nt0.79□□□□□ -2.28
CHL4P38907 RKR1YMR247C 4689 nt0.79□□□□□ -2.28
CHL4P38907 BFR2YDR299W 1605 nt0.78□□□□□ -2.28
CHL4P38907 YCR018C-AYCR018C-A 255 nt0.78□□□□□ -2.28
CHL4P38907 YDL185C-AYDL185C-A 228 nt0.78□□□□□ -2.28
CHL4P38907 PAA1YDR071C 576 nt0.78□□□□□ -2.28
CHL4P38907 YJL026C-AYJL026C-A 222 nt0.78□□□□□ -2.28
CHL4P38907 KAP120YPL125W 3099 nt0.78□□□□□ -2.28
CHL4P38907 YIR030W-AYIR030W-A 384 nt0.77□□□□□ -2.29
CHL4P38907 YAL067W-AYAL067W-A 228 nt0.77□□□□□ -2.29
CHL4P38907 YBR182C-AYBR182C-A 195 nt0.77□□□□□ -2.29
CHL4P38907 YPR117WYPR117W 7470 nt0.77□□□□□ -2.29
CHL4P38907 COY1YKL179C 2040 nt0.77□□□□□ -2.29
CHL4P38907 MYO1YHR023W 5787 nt0.76□□□□□ -2.29
CHL4P38907 YKU70YMR284W 1809 nt0.76□□□□□ -2.29
CHL4P38907 YOR345CYOR345C 351 nt0.76□□□□□ -2.29
CHL4P38907 YBR131C-AYBR131C-A 90 nt0.76□□□□□ -2.29
CHL4P38907 RPL26BYGR034W 384 nt0.75□□□□□ -2.29
CHL4P38907 RPS30BYOR182C 192 nt0.75□□□□□ -2.29
CHL4P38907 YOR302WYOR302W 78 nt0.75□□□□□ -2.29
CHL4P38907 ASE1YOR058C 2658 nt0.73□□□□□ -2.29
CHL4P38907 YMR158W-BYMR158W-B 321 nt0.73□□□□□ -2.29
CHL4P38907 YOR161W-AYOR161W-A 81 nt0.73□□□□□ -2.29
CHL4P38907 YCR038W-AYCR038W-A 126 nt0.72□□□□□ -2.29
CHL4P38907 snR190snR190 190 nt0.72□□□□□ -2.29
CHL4P38907 YGL123C-AYGL123C-A 231 nt0.71□□□□□ -2.3
CHL4P38907 PAM16YJL104W 450 nt0.71□□□□□ -2.3
CHL4P38907 YLR282CYLR282C 342 nt0.71□□□□□ -2.3
CHL4P38907 PMP1YCR024C-A 123 nt0.7□□□□□ -2.3
CHL4P38907 ULI1YFR026C 510 nt0.7□□□□□ -2.3
CHL4P38907 YIL134C-AYIL134C-A 204 nt0.7□□□□□ -2.3
CHL4P38907 COX12YLR038C 252 nt0.7□□□□□ -2.3
CHL4P38907 SEC1YDR164C 2175 nt0.69□□□□□ -2.3
CHL4P38907 YER053C-AYER053C-A 114 nt0.68□□□□□ -2.3
CHL4P38907 STF2YGR008C 255 nt0.67□□□□□ -2.3
CHL4P38907 APQ12YIL040W 417 nt0.67□□□□□ -2.3
CHL4P38907 BLI1YKL061W 342 nt0.67□□□□□ -2.3
CHL4P38907 PRP16YKR086W 3216 nt0.66□□□□□ -2.3
CHL4P38907 YDL073WYDL073W 2955 nt0.66□□□□□ -2.3
CHL4P38907 COX5BYIL111W 456 nt0.65□□□□□ -2.31
CHL4P38907 FYV10YIL097W 1551 nt0.65□□□□□ -2.31
CHL4P38907 YML002WYML002W 2214 nt0.65□□□□□ -2.31
CHL4P38907 SEC8YPR055W 3198 nt0.64□□□□□ -2.31
CHL4P38907 CHS6YJL099W 2241 nt0.64□□□□□ -2.31
Retrieved 100 of 7,029 protein–RNA pairs in 28.7 ms