Protein–RNA interactions for Protein: P38779

CIC1, Proteasome-interacting protein CIC1, yeastyeast

Known RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CIC1P38779 GCN2YDR283C 4980 nt2.18□□□□□ -2.06
CIC1P38779 YFR012W-AYFR012W-A 87 nt2.18□□□□□ -2.06
CIC1P38779 EMC5YIL027C 426 nt2.18□□□□□ -2.06
CIC1P38779 YAL067W-AYAL067W-A 228 nt2.17□□□□□ -2.06
CIC1P38779 YNL211CYNL211C 261 nt2.17□□□□□ -2.06
CIC1P38779 KCS1YDR017C 3153 nt2.17□□□□□ -2.06
CIC1P38779 PAN2YGL094C 3348 nt2.16□□□□□ -2.06
CIC1P38779 YMR272W-BYMR272W-B 108 nt2.16□□□□□ -2.06
CIC1P38779 CDC31YOR257W 486 nt2.16□□□□□ -2.06
CIC1P38779 YER053C-AYER053C-A 114 nt2.15□□□□□ -2.07
CIC1P38779 MYO4YAL029C 4416 nt2.15□□□□□ -2.07
CIC1P38779 YCS4YLR272C 3531 nt2.14□□□□□ -2.07
CIC1P38779 RAD50YNL250W 3939 nt2.14□□□□□ -2.07
CIC1P38779 YOR329W-AYOR329W-A 210 nt2.14□□□□□ -2.07
CIC1P38779 UFD2YDL190C 2886 nt2.14□□□□□ -2.07
CIC1P38779 PRP5YBR237W 2550 nt2.13□□□□□ -2.07
CIC1P38779 FKS1YLR342W 5631 nt2.13□□□□□ -2.07
CIC1P38779 SKI3YPR189W 4299 nt2.13□□□□□ -2.07
CIC1P38779 tL(UAA)QtL(UAA)Q 85 nt2.12□□□□□ -2.07
CIC1P38779 COA6YMR244C-A 315 nt2.11□□□□□ -2.07
CIC1P38779 YLL054CYLL054C 2532 nt2.1□□□□□ -2.07
CIC1P38779 YMR045CYMR045C 5268 nt2.1□□□□□ -2.07
CIC1P38779 MMS4YBR098W 2076 nt2.1□□□□□ -2.07
CIC1P38779 LHS1YKL073W 2646 nt2.09□□□□□ -2.07
CIC1P38779 YBR178WYBR178W 375 nt2.09□□□□□ -2.07
CIC1P38779 SLX4YLR135W 2247 nt2.09□□□□□ -2.08
CIC1P38779 KIP1YBL063W 3336 nt2.08□□□□□ -2.08
CIC1P38779 YOR019WYOR019W 2193 nt2.08□□□□□ -2.08
CIC1P38779 YGL123C-AYGL123C-A 231 nt2.08□□□□□ -2.08
CIC1P38779 BPH1YCR032W 6504 nt2.07□□□□□ -2.08
CIC1P38779 YDR524C-AYDR524C-A 120 nt2.07□□□□□ -2.08
CIC1P38779 snR14snR14 160 nt2.07□□□□□ -2.08
CIC1P38779 YAR009CYAR009C 3591 nt2.06□□□□□ -2.08
CIC1P38779 BFR2YDR299W 1605 nt2.06□□□□□ -2.08
CIC1P38779 RSM22YKL155C 1887 nt2.05□□□□□ -2.08
CIC1P38779 PEP1YBL017C 4740 nt2.04□□□□□ -2.08
CIC1P38779 SMC4YLR086W 4257 nt2.04□□□□□ -2.08
CIC1P38779 KAP122YGL016W 3246 nt2.03□□□□□ -2.08
CIC1P38779 YLR422WYLR422W 5799 nt2.03□□□□□ -2.08
CIC1P38779 YGL182CYGL182C 324 nt2.03□□□□□ -2.08
CIC1P38779 EAF1YDR359C 2949 nt2.02□□□□□ -2.09
CIC1P38779 MON2YNL297C 4911 nt2.02□□□□□ -2.09
CIC1P38779 YOR161W-AYOR161W-A 81 nt2.02□□□□□ -2.09
CIC1P38779 YIL071W-AYIL071W-A 477 nt2.01□□□□□ -2.09
CIC1P38779 COX5BYIL111W 456 nt2.01□□□□□ -2.09
CIC1P38779 YLL020CYLL020C 306 nt2.01□□□□□ -2.09
CIC1P38779 TMA7YLR262C-A 195 nt2.01□□□□□ -2.09
CIC1P38779 FAB1YFR019W 6837 nt2□□□□□ -2.09
CIC1P38779 RTP1YMR185W 2946 nt2□□□□□ -2.09
CIC1P38779 YKL100W-AYKL100W-A 90 nt2□□□□□ -2.09
CIC1P38779 YMR247W-AYMR247W-A 144 nt2□□□□□ -2.09
CIC1P38779 CHS6YJL099W 2241 nt2□□□□□ -2.09
CIC1P38779 STB6YKL072W 2301 nt2□□□□□ -2.09
CIC1P38779 YBL109WYBL109W 336 nt1.99□□□□□ -2.09
CIC1P38779 OST4YDL232W 111 nt1.98□□□□□ -2.09
CIC1P38779 UTP8YGR128C 2142 nt1.98□□□□□ -2.09
CIC1P38779 YBL039C-AYBL039C-A 84 nt1.98□□□□□ -2.09
CIC1P38779 CMC4YMR194C-B 222 nt1.98□□□□□ -2.09
CIC1P38779 TRM732YMR259C 4263 nt1.97□□□□□ -2.09
CIC1P38779 YLR282CYLR282C 342 nt1.97□□□□□ -2.09
CIC1P38779 YBR099CYBR099C 384 nt1.96□□□□□ -2.1
CIC1P38779 SET3YKR029C 2256 nt1.96□□□□□ -2.1
CIC1P38779 YCR095W-AYCR095W-A 159 nt1.95□□□□□ -2.1
CIC1P38779 CFT1YDR301W 4074 nt1.95□□□□□ -2.1
CIC1P38779 STO1YMR125W 2586 nt1.95□□□□□ -2.1
CIC1P38779 NOP9YJL010C 2001 nt1.93□□□□□ -2.1
CIC1P38779 NUP157YER105C 4176 nt1.93□□□□□ -2.1
CIC1P38779 YDR544CYDR544C 429 nt1.93□□□□□ -2.1
CIC1P38779 tT(UGU)HtT(UGU)H 72 nt1.93□□□□□ -2.1
CIC1P38779 MYO2YOR326W 4725 nt1.92□□□□□ -2.1
CIC1P38779 TFB5YDR079C-A 219 nt1.91□□□□□ -2.1
CIC1P38779 YML002WYML002W 2214 nt1.9□□□□□ -2.1
CIC1P38779 SMC1YFL008W 3678 nt1.9□□□□□ -2.11
CIC1P38779 TAH1YCR060W 336 nt1.9□□□□□ -2.11
CIC1P38779 YLR041WYLR041W 321 nt1.9□□□□□ -2.11
CIC1P38779 YNL067W-BYNL067W-B 141 nt1.9□□□□□ -2.11
CIC1P38779 YNL103W-AYNL103W-A 90 nt1.9□□□□□ -2.11
CIC1P38779 PMP2YEL017C-A 132 nt1.89□□□□□ -2.11
CIC1P38779 SWI4YER111C 3282 nt1.88□□□□□ -2.11
CIC1P38779 PKH3YDR466W 2697 nt1.88□□□□□ -2.11
CIC1P38779 ASE1YOR058C 2658 nt1.88□□□□□ -2.11
CIC1P38779 APL3YBL037W 3078 nt1.88□□□□□ -2.11
CIC1P38779 PMD1YER132C 5262 nt1.87□□□□□ -2.11
CIC1P38779 SOM1YEL059C-A 225 nt1.87□□□□□ -2.11
CIC1P38779 QCR9YGR183C 201 nt1.87□□□□□ -2.11
CIC1P38779 YMR326CYMR326C 309 nt1.87□□□□□ -2.11
CIC1P38779 WAR1YML076C 2835 nt1.86□□□□□ -2.11
CIC1P38779 SEC3YER008C 4011 nt1.86□□□□□ -2.11
CIC1P38779 snR39BsnR39B 96 nt1.86□□□□□ -2.11
CIC1P38779 IRC20YLR247C 4671 nt1.85□□□□□ -2.11
CIC1P38779 YOR093CYOR093C 4947 nt1.85□□□□□ -2.11
CIC1P38779 IRA1YBR140C 9279 nt1.84□□□□□ -2.11
CIC1P38779 FYV10YIL097W 1551 nt1.84□□□□□ -2.12
CIC1P38779 YHR214C-BYHR214C-B 5382 nt1.83□□□□□ -2.12
CIC1P38779 snR190snR190 190 nt1.83□□□□□ -2.12
CIC1P38779 BST1YFL025C 3090 nt1.82□□□□□ -2.12
CIC1P38779 SEC21YNL287W 2808 nt1.82□□□□□ -2.12
CIC1P38779 SAC3YDR159W 3906 nt1.82□□□□□ -2.12
CIC1P38779 RPL26BYGR034W 384 nt1.82□□□□□ -2.12
CIC1P38779 YHR131W-AYHR131W-A 246 nt1.82□□□□□ -2.12
Retrieved 100 of 7,029 protein–RNA pairs in 11.9 ms