Protein–RNA interactions for Protein: P36100

TFA1, Transcription initiation factor IIE subunit alpha, yeastyeast

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TFA1P36100 TAH1YCR060W 336 nt3.65□□□□□ -1.83
TFA1P36100 GYP5YPL249C 2685 nt3.65□□□□□ -1.83
TFA1P36100 SMC1YFL008W 3678 nt3.64□□□□□ -1.83
TFA1P36100 SEC31YDL195W 3822 nt3.64□□□□□ -1.83
TFA1P36100 MYO2YOR326W 4725 nt3.63□□□□□ -1.83
TFA1P36100 ATG9YDL149W 2994 nt3.62□□□□□ -1.83
TFA1P36100 YCS4YLR272C 3531 nt3.61□□□□□ -1.83
TFA1P36100 NUP157YER105C 4176 nt3.59□□□□□ -1.83
TFA1P36100 YAL037C-AYAL037C-A 93 nt3.59□□□□□ -1.83
TFA1P36100 NUM1YDR150W 8247 nt3.59□□□□□ -1.83
TFA1P36100 YAR009CYAR009C 3591 nt3.58□□□□□ -1.84
TFA1P36100 BNR1YIL159W 4128 nt3.57□□□□□ -1.84
TFA1P36100 RTP1YMR185W 2946 nt3.56□□□□□ -1.84
TFA1P36100 YML002WYML002W 2214 nt3.56□□□□□ -1.84
TFA1P36100 PDR8YLR266C 2106 nt3.56□□□□□ -1.84
TFA1P36100 BCK1YJL095W 4437 nt3.55□□□□□ -1.84
TFA1P36100 YLR422WYLR422W 5799 nt3.55□□□□□ -1.84
TFA1P36100 tC(GCA)BtC(GCA)B 72 nt3.55□□□□□ -1.84
TFA1P36100 tC(GCA)GtC(GCA)G 72 nt3.55□□□□□ -1.84
TFA1P36100 tC(GCA)P1tC(GCA)P1 72 nt3.55□□□□□ -1.84
TFA1P36100 tC(GCA)P2tC(GCA)P2 72 nt3.55□□□□□ -1.84
TFA1P36100 PDR3YBL005W 2931 nt3.55□□□□□ -1.84
TFA1P36100 snR62snR62 100 nt3.54□□□□□ -1.84
TFA1P36100 SLX4YLR135W 2247 nt3.54□□□□□ -1.84
TFA1P36100 tM(CAU)Q2tM(CAU)Q2 78 nt3.53□□□□□ -1.84
TFA1P36100 MGA2YIR033W 3342 nt3.52□□□□□ -1.85
TFA1P36100 YJL052C-AYJL052C-A 120 nt3.52□□□□□ -1.85
TFA1P36100 KAP120YPL125W 3099 nt3.52□□□□□ -1.85
TFA1P36100 YDR210WYDR210W 228 nt3.51□□□□□ -1.85
TFA1P36100 YOL019W-AYOL019W-A 153 nt3.51□□□□□ -1.85
TFA1P36100 SKI3YPR189W 4299 nt3.51□□□□□ -1.85
TFA1P36100 YLR419WYLR419W 4308 nt3.5□□□□□ -1.85
TFA1P36100 ROM2YLR371W 4071 nt3.5□□□□□ -1.85
TFA1P36100 FLO11YIR019C 4104 nt3.5□□□□□ -1.85
TFA1P36100 CYR1YJL005W 6081 nt3.48□□□□□ -1.85
TFA1P36100 BIR1YJR089W 2865 nt3.48□□□□□ -1.85
TFA1P36100 IRA2YOL081W 9240 nt3.48□□□□□ -1.85
TFA1P36100 AXL1YPR122W 3627 nt3.47□□□□□ -1.85
TFA1P36100 YLR041WYLR041W 321 nt3.47□□□□□ -1.85
TFA1P36100 KCS1YDR017C 3153 nt3.47□□□□□ -1.85
TFA1P36100 SAP1YER047C 2694 nt3.46□□□□□ -1.86
TFA1P36100 YBR072C-AYBR072C-A 162 nt3.46□□□□□ -1.86
TFA1P36100 TOR1YJR066W 7413 nt3.46□□□□□ -1.86
TFA1P36100 LCL1YPL056C 306 nt3.45□□□□□ -1.86
TFA1P36100 VPS13YLL040C 9435 nt3.44□□□□□ -1.86
TFA1P36100 CDC25YLR310C 4770 nt3.44□□□□□ -1.86
TFA1P36100 DBP10YDL031W 2988 nt3.43□□□□□ -1.86
TFA1P36100 YNL266WYNL266W 420 nt3.42□□□□□ -1.86
TFA1P36100 SVL3YPL032C 2478 nt3.42□□□□□ -1.86
TFA1P36100 UBR2YLR024C 5619 nt3.41□□□□□ -1.86
TFA1P36100 NOP9YJL010C 2001 nt3.41□□□□□ -1.86
TFA1P36100 RPM2YML091C 3609 nt3.4□□□□□ -1.86
TFA1P36100 SEC1YDR164C 2175 nt3.4□□□□□ -1.87
TFA1P36100 SMC4YLR086W 4257 nt3.4□□□□□ -1.87
TFA1P36100 YHR180W-AYHR180W-A 183 nt3.39□□□□□ -1.87
TFA1P36100 YJL127W-AYJL127W-A 117 nt3.38□□□□□ -1.87
TFA1P36100 SEC21YNL287W 2808 nt3.38□□□□□ -1.87
TFA1P36100 YLR232WYLR232W 348 nt3.37□□□□□ -1.87
TFA1P36100 SAC3YDR159W 3906 nt3.37□□□□□ -1.87
TFA1P36100 snR14snR14 160 nt3.36□□□□□ -1.87
TFA1P36100 RGA1YOR127W 3024 nt3.36□□□□□ -1.87
TFA1P36100 FYV10YIL097W 1551 nt3.34□□□□□ -1.87
TFA1P36100 ESC1YMR219W 4977 nt3.34□□□□□ -1.88
TFA1P36100 KAP122YGL016W 3246 nt3.34□□□□□ -1.88
TFA1P36100 RPL26BYGR034W 384 nt3.33□□□□□ -1.88
TFA1P36100 YGR146C-AYGR146C-A 162 nt3.33□□□□□ -1.88
TFA1P36100 MBB1YJL199C 327 nt3.33□□□□□ -1.88
TFA1P36100 RAD9YDR217C 3930 nt3.32□□□□□ -1.88
TFA1P36100 STO1YMR125W 2586 nt3.32□□□□□ -1.88
TFA1P36100 TMA7YLR262C-A 195 nt3.32□□□□□ -1.88
TFA1P36100 UFD4YKL010C 4452 nt3.31□□□□□ -1.88
TFA1P36100 YOL083C-AYOL083C-A 141 nt3.31□□□□□ -1.88
TFA1P36100 CSF1YLR087C 8877 nt3.31□□□□□ -1.88
TFA1P36100 SET3YKR029C 2256 nt3.3□□□□□ -1.88
TFA1P36100 TRA1YHR099W 11235 nt3.3□□□□□ -1.88
TFA1P36100 CHS1YNL192W 3396 nt3.3□□□□□ -1.88
TFA1P36100 YOL098CYOL098C 3114 nt3.29□□□□□ -1.88
TFA1P36100 YBL071C-BYBL071C-B 99 nt3.29□□□□□ -1.88
TFA1P36100 snR190snR190 190 nt3.29□□□□□ -1.88
TFA1P36100 WAR1YML076C 2835 nt3.29□□□□□ -1.88
TFA1P36100 PDR1YGL013C 3207 nt3.28□□□□□ -1.88
TFA1P36100 FKS3YMR306W 5358 nt3.28□□□□□ -1.88
TFA1P36100 ARP8YOR141C 2646 nt3.27□□□□□ -1.89
TFA1P36100 tW(CCA)G1tW(CCA)G1 72 nt3.24□□□□□ -1.89
TFA1P36100 tW(CCA)G2tW(CCA)G2 72 nt3.24□□□□□ -1.89
TFA1P36100 tW(CCA)JtW(CCA)J 72 nt3.24□□□□□ -1.89
TFA1P36100 tW(CCA)KtW(CCA)K 72 nt3.24□□□□□ -1.89
TFA1P36100 tW(CCA)MtW(CCA)M 72 nt3.24□□□□□ -1.89
TFA1P36100 tW(CCA)PtW(CCA)P 72 nt3.24□□□□□ -1.89
TFA1P36100 USO1YDL058W 5373 nt3.24□□□□□ -1.89
TFA1P36100 BPH1YCR032W 6504 nt3.23□□□□□ -1.89
TFA1P36100 ASE1YOR058C 2658 nt3.22□□□□□ -1.89
TFA1P36100 YDL073WYDL073W 2955 nt3.21□□□□□ -1.89
TFA1P36100 APL3YBL037W 3078 nt3.21□□□□□ -1.9
TFA1P36100 STH1YIL126W 4080 nt3.2□□□□□ -1.9
TFA1P36100 BNI1YNL271C 5862 nt3.2□□□□□ -1.9
TFA1P36100 SWI4YER111C 3282 nt3.19□□□□□ -1.9
TFA1P36100 PDR11YIL013C 4236 nt3.17□□□□□ -1.9
TFA1P36100 snR70snR70 164 nt3.17□□□□□ -1.9
TFA1P36100 YDR034C-AYDR034C-A 177 nt3.16□□□□□ -1.9
Retrieved 100 of 7,029 protein–RNA pairs in 88.7 ms