Protein–RNA interactions for Protein: P36026

UBP11, Ubiquitin carboxyl-terminal hydrolase 11, yeastyeast

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP11P36026 YEL020C-BYEL020C-B 198 nt1.24□□□□□ -2.21
UBP11P36026 tV(UAC)BtV(UAC)B 74 nt1.23□□□□□ -2.21
UBP11P36026 tV(UAC)DtV(UAC)D 74 nt1.23□□□□□ -2.21
UBP11P36026 YPL152W-AYPL152W-A 99 nt1.23□□□□□ -2.21
UBP11P36026 KAP120YPL125W 3099 nt1.22□□□□□ -2.21
UBP11P36026 YMR172C-AYMR172C-A 384 nt1.21□□□□□ -2.22
UBP11P36026 YBR064WYBR064W 429 nt1.21□□□□□ -2.22
UBP11P36026 YJL197C-AYJL197C-A 282 nt1.2□□□□□ -2.22
UBP11P36026 YOR015WYOR015W 360 nt1.2□□□□□ -2.22
UBP11P36026 YHR063W-AYHR063W-A 336 nt1.19□□□□□ -2.22
UBP11P36026 WAR1YML076C 2835 nt1.19□□□□□ -2.22
UBP11P36026 MCM10YIL150C 1716 nt1.18□□□□□ -2.22
UBP11P36026 BEM2YER155C 6504 nt1.18□□□□□ -2.22
UBP11P36026 YGL052WYGL052W 306 nt1.18□□□□□ -2.22
UBP11P36026 PAU12YGR294W 363 nt1.16□□□□□ -2.22
UBP11P36026 PAU24YBR301W 363 nt1.16□□□□□ -2.22
UBP11P36026 OLI1Q0130 231 nt1.15□□□□□ -2.23
UBP11P36026 snR49snR49 165 nt1.15□□□□□ -2.23
UBP11P36026 SMC1YFL008W 3678 nt1.14□□□□□ -2.23
UBP11P36026 APL1YJR005W 2103 nt1.14□□□□□ -2.23
UBP11P36026 YJR029WYJR029W 5268 nt1.14□□□□□ -2.23
UBP11P36026 YPR137C-BYPR137C-B 5268 nt1.14□□□□□ -2.23
UBP11P36026 PAA1YDR071C 576 nt1.13□□□□□ -2.23
UBP11P36026 RPS30BYOR182C 192 nt1.13□□□□□ -2.23
UBP11P36026 YPR092WYPR092W 306 nt1.13□□□□□ -2.23
UBP11P36026 NOP9YJL010C 2001 nt1.12□□□□□ -2.23
UBP11P36026 YCR022CYCR022C 345 nt1.12□□□□□ -2.23
UBP11P36026 YOR282WYOR282W 321 nt1.12□□□□□ -2.23
UBP11P36026 ISD11YER048W-A 285 nt1.11□□□□□ -2.23
UBP11P36026 ECM12YHR021W-A 456 nt1.11□□□□□ -2.23
UBP11P36026 YJL026C-AYJL026C-A 222 nt1.11□□□□□ -2.23
UBP11P36026 SGF11YPL047W 300 nt1.11□□□□□ -2.23
UBP11P36026 SPT7YBR081C 3999 nt1.11□□□□□ -2.23
UBP11P36026 PRP16YKR086W 3216 nt1.11□□□□□ -2.23
UBP11P36026 YPR117WYPR117W 7470 nt1.1□□□□□ -2.23
UBP11P36026 CMC4YMR194C-B 222 nt1.1□□□□□ -2.23
UBP11P36026 YMR307C-AYMR307C-A 195 nt1.1□□□□□ -2.23
UBP11P36026 YOR072W-BYOR072W-B 162 nt1.1□□□□□ -2.23
UBP11P36026 VAM6YDL077C 3150 nt1.09□□□□□ -2.23
UBP11P36026 YAL067W-AYAL067W-A 228 nt1.09□□□□□ -2.23
UBP11P36026 YPL044CYPL044C 549 nt1.09□□□□□ -2.23
UBP11P36026 tF(GAA)QtF(GAA)Q 75 nt1.08□□□□□ -2.24
UBP11P36026 YGL188C-AYGL188C-A 141 nt1.08□□□□□ -2.24
UBP11P36026 YNL211CYNL211C 261 nt1.08□□□□□ -2.24
UBP11P36026 BUD3YCL014W 4911 nt1.08□□□□□ -2.24
UBP11P36026 snR55snR55 98 nt1.07□□□□□ -2.24
UBP11P36026 YDR354C-AYDR354C-A 144 nt1.07□□□□□ -2.24
UBP11P36026 GEA2YEL022W 4380 nt1.07□□□□□ -2.24
UBP11P36026 snR8snR8 190 nt1.06□□□□□ -2.24
UBP11P36026 YOL155W-AYOL155W-A 135 nt1.06□□□□□ -2.24
UBP11P36026 SCC2YDR180W 4482 nt1.05□□□□□ -2.24
UBP11P36026 snR74snR74 88 nt1.05□□□□□ -2.24
UBP11P36026 YDL196WYDL196W 330 nt1.05□□□□□ -2.24
UBP11P36026 ASE1YOR058C 2658 nt1.05□□□□□ -2.24
UBP11P36026 RPL26BYGR034W 384 nt1.04□□□□□ -2.24
UBP11P36026 QCR9YGR183C 201 nt1.04□□□□□ -2.24
UBP11P36026 YIR030W-AYIR030W-A 384 nt1.04□□□□□ -2.24
UBP11P36026 YLL019W-AYLL019W-A 93 nt1.04□□□□□ -2.24
UBP11P36026 MYO1YHR023W 5787 nt1.04□□□□□ -2.24
UBP11P36026 YDL073WYDL073W 2955 nt1.04□□□□□ -2.24
UBP11P36026 EMT1tM(CAU)D 73 nt1.03□□□□□ -2.24
UBP11P36026 EMT5tM(CAU)J1 73 nt1.03□□□□□ -2.24
UBP11P36026 EMT3tM(CAU)J2 73 nt1.03□□□□□ -2.24
UBP11P36026 EMT4tM(CAU)M 73 nt1.03□□□□□ -2.24
UBP11P36026 EMT2tM(CAU)O2 73 nt1.03□□□□□ -2.24
UBP11P36026 ABF2YMR072W 552 nt1.03□□□□□ -2.24
UBP11P36026 PMP1YCR024C-A 123 nt1.01□□□□□ -2.25
UBP11P36026 YBR182C-AYBR182C-A 195 nt1.01□□□□□ -2.25
UBP11P36026 YKU70YMR284W 1809 nt1.01□□□□□ -2.25
UBP11P36026 YIL142C-AYIL142C-A 333 nt1□□□□□ -2.25
UBP11P36026 PAM16YJL104W 450 nt1□□□□□ -2.25
UBP11P36026 YSP1YHR155W 3687 nt0.98□□□□□ -2.25
UBP11P36026 tF(GAA)BtF(GAA)B 73 nt0.98□□□□□ -2.25
UBP11P36026 tF(GAA)FtF(GAA)F 73 nt0.98□□□□□ -2.25
UBP11P36026 tF(GAA)GtF(GAA)G 73 nt0.98□□□□□ -2.25
UBP11P36026 tF(GAA)H1tF(GAA)H1 73 nt0.98□□□□□ -2.25
UBP11P36026 tF(GAA)H2tF(GAA)H2 73 nt0.98□□□□□ -2.25
UBP11P36026 tF(GAA)MtF(GAA)M 73 nt0.98□□□□□ -2.25
UBP11P36026 tF(GAA)P1tF(GAA)P1 73 nt0.98□□□□□ -2.25
UBP11P36026 tF(GAA)P2tF(GAA)P2 73 nt0.98□□□□□ -2.25
UBP11P36026 SEC8YPR055W 3198 nt0.98□□□□□ -2.25
UBP11P36026 DOP1YDR141C 5097 nt0.97□□□□□ -2.25
UBP11P36026 HAL9YOL089C 3093 nt0.97□□□□□ -2.25
UBP11P36026 NPR2YEL062W 1848 nt0.96□□□□□ -2.26
UBP11P36026 YFR012W-AYFR012W-A 87 nt0.96□□□□□ -2.26
UBP11P36026 BFR2YDR299W 1605 nt0.96□□□□□ -2.26
UBP11P36026 YCR018C-AYCR018C-A 255 nt0.95□□□□□ -2.26
UBP11P36026 YDL185C-AYDL185C-A 228 nt0.95□□□□□ -2.26
UBP11P36026 YDR366CYDR366C 399 nt0.94□□□□□ -2.26
UBP11P36026 YGL041CYGL041C 204 nt0.94□□□□□ -2.26
UBP11P36026 YKL100W-AYKL100W-A 90 nt0.94□□□□□ -2.26
UBP11P36026 LTE1YAL024C 4308 nt0.93□□□□□ -2.26
UBP11P36026 COX5BYIL111W 456 nt0.93□□□□□ -2.26
UBP11P36026 YLR399W-AYLR399W-A 105 nt0.93□□□□□ -2.26
UBP11P36026 snR80snR80 171 nt0.92□□□□□ -2.26
UBP11P36026 snR190snR190 190 nt0.92□□□□□ -2.26
UBP11P36026 YPR160W-AYPR160W-A 81 nt0.92□□□□□ -2.26
UBP11P36026 BLI1YKL061W 342 nt0.91□□□□□ -2.26
UBP11P36026 COX12YLR038C 252 nt0.91□□□□□ -2.26
UBP11P36026 YLR282CYLR282C 342 nt0.91□□□□□ -2.26
Retrieved 100 of 7,029 protein–RNA pairs in 136.5 ms