Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC21.87■■□□□ 1.09
KRT9P35527 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
KRT9P35527 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
KRT9P35527 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
KRT9P35527 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
KRT9P35527 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
KRT9P35527 CDV3P1-201ENST00000471403 739 ntBASIC21.87■■□□□ 1.09
KRT9P35527 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.87■■□□□ 1.09
KRT9P35527 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC21.87■■□□□ 1.09
KRT9P35527 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
KRT9P35527 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
KRT9P35527 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC21.87■■□□□ 1.09
KRT9P35527 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
KRT9P35527 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
KRT9P35527 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.86■■□□□ 1.09
KRT9P35527 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
KRT9P35527 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
KRT9P35527 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.86■■□□□ 1.09
KRT9P35527 AC006015.1-201ENST00000429970 570 ntBASIC21.86■■□□□ 1.09
KRT9P35527 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
KRT9P35527 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
KRT9P35527 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC21.86■■□□□ 1.09
KRT9P35527 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC21.86■■□□□ 1.09
KRT9P35527 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC21.86■■□□□ 1.09
KRT9P35527 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
KRT9P35527 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC21.86■■□□□ 1.09
KRT9P35527 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
KRT9P35527 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
KRT9P35527 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
KRT9P35527 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC21.85■■□□□ 1.09
KRT9P35527 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
KRT9P35527 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC21.85■■□□□ 1.09
KRT9P35527 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
KRT9P35527 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
KRT9P35527 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
KRT9P35527 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC21.85■■□□□ 1.09
KRT9P35527 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
KRT9P35527 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC21.85■■□□□ 1.09
KRT9P35527 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC21.85■■□□□ 1.09
KRT9P35527 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
KRT9P35527 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.85■■□□□ 1.09
KRT9P35527 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
KRT9P35527 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.85■■□□□ 1.09
KRT9P35527 FAM21FP-204ENST00000608637 956 ntBASIC21.85■■□□□ 1.09
KRT9P35527 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
KRT9P35527 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.85■■□□□ 1.09
KRT9P35527 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
KRT9P35527 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
KRT9P35527 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
KRT9P35527 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
KRT9P35527 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
KRT9P35527 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
KRT9P35527 AC018445.3-201ENST00000624177 1945 ntBASIC21.84■■□□□ 1.09
KRT9P35527 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
KRT9P35527 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
KRT9P35527 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
KRT9P35527 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
KRT9P35527 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC21.84■■□□□ 1.09
KRT9P35527 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.84■■□□□ 1.09
KRT9P35527 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
KRT9P35527 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.84■■□□□ 1.09
KRT9P35527 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
KRT9P35527 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
KRT9P35527 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
KRT9P35527 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.84■■□□□ 1.09
KRT9P35527 MFSD11-216ENST00000590393 1141 ntBASIC21.84■■□□□ 1.09
KRT9P35527 AC022517.1-201ENST00000592429 346 ntBASIC21.84■■□□□ 1.09
KRT9P35527 AL591742.1-201ENST00000604433 565 ntBASIC21.84■■□□□ 1.09
KRT9P35527 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.84■■□□□ 1.09
KRT9P35527 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC21.84■■□□□ 1.09
KRT9P35527 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
KRT9P35527 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
KRT9P35527 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
KRT9P35527 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
KRT9P35527 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
KRT9P35527 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.84■■□□□ 1.09
KRT9P35527 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
KRT9P35527 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
KRT9P35527 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
KRT9P35527 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
KRT9P35527 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
KRT9P35527 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.83■■□□□ 1.09
KRT9P35527 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.83■■□□□ 1.09
KRT9P35527 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.83■■□□□ 1.09
KRT9P35527 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.83■■□□□ 1.09
KRT9P35527 AC013268.1-206ENST00000638368 961 ntBASIC21.83■■□□□ 1.09
KRT9P35527 AC112229.1-201ENST00000639295 961 ntBASIC21.83■■□□□ 1.09
KRT9P35527 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
KRT9P35527 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
KRT9P35527 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
KRT9P35527 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
KRT9P35527 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.08
KRT9P35527 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
KRT9P35527 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.83■■□□□ 1.08
KRT9P35527 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
KRT9P35527 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
KRT9P35527 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
KRT9P35527 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.82■■□□□ 1.08
KRT9P35527 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
KRT9P35527 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms