Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.2■□□□□ 0.82
RPA3P35244 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
RPA3P35244 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
RPA3P35244 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.2■□□□□ 0.82
RPA3P35244 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.2■□□□□ 0.82
RPA3P35244 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
RPA3P35244 MYCNOS-205ENST00000641950 531 ntBASIC20.2■□□□□ 0.82
RPA3P35244 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
RPA3P35244 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.2■□□□□ 0.82
RPA3P35244 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
RPA3P35244 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RPA3P35244 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RPA3P35244 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
RPA3P35244 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
RPA3P35244 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RPA3P35244 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RPA3P35244 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
RPA3P35244 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
RPA3P35244 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.2■□□□□ 0.82
RPA3P35244 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RPA3P35244 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RPA3P35244 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RPA3P35244 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.19■□□□□ 0.82
RPA3P35244 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.19■□□□□ 0.82
RPA3P35244 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RPA3P35244 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RPA3P35244 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
RPA3P35244 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.19■□□□□ 0.82
RPA3P35244 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RPA3P35244 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.19■□□□□ 0.82
RPA3P35244 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
RPA3P35244 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RPA3P35244 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.19■□□□□ 0.82
RPA3P35244 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.19■□□□□ 0.82
RPA3P35244 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RPA3P35244 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RPA3P35244 TMEM179-206ENST00000616017 1645 ntBASIC20.19■□□□□ 0.82
RPA3P35244 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RPA3P35244 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
RPA3P35244 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.19■□□□□ 0.82
RPA3P35244 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.19■□□□□ 0.82
RPA3P35244 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RPA3P35244 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.18■□□□□ 0.82
RPA3P35244 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
RPA3P35244 AC093484.2-201ENST00000580996 2166 ntBASIC20.18■□□□□ 0.82
RPA3P35244 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RPA3P35244 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RPA3P35244 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.18■□□□□ 0.82
RPA3P35244 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.18■□□□□ 0.82
RPA3P35244 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.18■□□□□ 0.82
RPA3P35244 SLC7A5P1-201ENST00000568957 537 ntBASIC20.18■□□□□ 0.82
RPA3P35244 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.18■□□□□ 0.82
RPA3P35244 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.18■□□□□ 0.82
RPA3P35244 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.18■□□□□ 0.82
RPA3P35244 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.18■□□□□ 0.82
RPA3P35244 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RPA3P35244 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RPA3P35244 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
RPA3P35244 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RPA3P35244 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.18■□□□□ 0.82
RPA3P35244 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RPA3P35244 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RPA3P35244 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RPA3P35244 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RPA3P35244 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RPA3P35244 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RPA3P35244 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.17■□□□□ 0.82
RPA3P35244 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
RPA3P35244 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RPA3P35244 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RPA3P35244 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RPA3P35244 AC116050.2-201ENST00000612102 1779 ntBASIC20.17■□□□□ 0.82
RPA3P35244 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.17■□□□□ 0.82
RPA3P35244 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.17■□□□□ 0.82
RPA3P35244 AC006015.1-201ENST00000429970 570 ntBASIC20.17■□□□□ 0.82
RPA3P35244 AC245052.3-201ENST00000450182 901 ntBASIC20.17■□□□□ 0.82
RPA3P35244 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.17■□□□□ 0.82
RPA3P35244 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.17■□□□□ 0.82
RPA3P35244 AL137784.2-201ENST00000607332 1000 ntBASIC20.17■□□□□ 0.82
RPA3P35244 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.17■□□□□ 0.82
RPA3P35244 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.17■□□□□ 0.82
RPA3P35244 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RPA3P35244 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RPA3P35244 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.17■□□□□ 0.82
RPA3P35244 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RPA3P35244 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RPA3P35244 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RPA3P35244 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RPA3P35244 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RPA3P35244 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RPA3P35244 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RPA3P35244 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.16■□□□□ 0.82
RPA3P35244 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.16■□□□□ 0.82
RPA3P35244 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.16■□□□□ 0.82
RPA3P35244 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
RPA3P35244 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.16■□□□□ 0.82
RPA3P35244 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.16■□□□□ 0.82
RPA3P35244 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.16■□□□□ 0.82
RPA3P35244 IKBKGP1-201ENST00000612193 1073 ntBASIC20.16■□□□□ 0.82
RPA3P35244 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms