Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LSP1P33241 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.09■□□□□ 0.81
LSP1P33241 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LSP1P33241 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC20.09■□□□□ 0.81
LSP1P33241 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LSP1P33241 AC135050.7-201ENST00000624508 2218 ntBASIC20.09■□□□□ 0.81
LSP1P33241 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
LSP1P33241 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LSP1P33241 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC20.09■□□□□ 0.81
LSP1P33241 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
LSP1P33241 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LSP1P33241 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
LSP1P33241 DPP3P2-201ENST00000416030 1696 ntBASIC20.09■□□□□ 0.81
LSP1P33241 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.09■□□□□ 0.81
LSP1P33241 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LSP1P33241 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LSP1P33241 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
LSP1P33241 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.08■□□□□ 0.81
LSP1P33241 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
LSP1P33241 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
LSP1P33241 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LSP1P33241 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
LSP1P33241 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LSP1P33241 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LSP1P33241 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
LSP1P33241 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC20.08■□□□□ 0.81
LSP1P33241 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LSP1P33241 AP004607.4-201ENST00000530158 1459 ntBASIC20.08■□□□□ 0.81
LSP1P33241 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.08■□□□□ 0.81
LSP1P33241 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
LSP1P33241 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
LSP1P33241 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.08■□□□□ 0.81
LSP1P33241 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.08■□□□□ 0.8
LSP1P33241 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
LSP1P33241 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC20.08■□□□□ 0.8
LSP1P33241 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.08■□□□□ 0.8
LSP1P33241 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
LSP1P33241 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.08■□□□□ 0.8
LSP1P33241 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.08■□□□□ 0.8
LSP1P33241 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC20.08■□□□□ 0.8
LSP1P33241 FZD10-202ENST00000539839 3282 ntBASIC20.07■□□□□ 0.8
LSP1P33241 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
LSP1P33241 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.07■□□□□ 0.8
LSP1P33241 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.07■□□□□ 0.8
LSP1P33241 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LSP1P33241 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.07■□□□□ 0.8
LSP1P33241 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LSP1P33241 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LSP1P33241 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LSP1P33241 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
LSP1P33241 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
LSP1P33241 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
LSP1P33241 MIR4787-201ENST00000607364 84 ntBASIC20.07■□□□□ 0.8
LSP1P33241 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.07■□□□□ 0.8
LSP1P33241 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
LSP1P33241 COMP-202ENST00000425807 2292 ntTSL 2 BASIC20.07■□□□□ 0.8
LSP1P33241 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LSP1P33241 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LSP1P33241 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LSP1P33241 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.06■□□□□ 0.8
LSP1P33241 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
LSP1P33241 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
LSP1P33241 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.06■□□□□ 0.8
LSP1P33241 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LSP1P33241 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LSP1P33241 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
LSP1P33241 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.06■□□□□ 0.8
LSP1P33241 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.06■□□□□ 0.8
LSP1P33241 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.06■□□□□ 0.8
LSP1P33241 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LSP1P33241 AP000997.3-201ENST00000623333 2250 ntBASIC20.06■□□□□ 0.8
LSP1P33241 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
LSP1P33241 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.06■□□□□ 0.8
LSP1P33241 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LSP1P33241 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.06■□□□□ 0.8
LSP1P33241 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LSP1P33241 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LSP1P33241 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
LSP1P33241 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
LSP1P33241 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LSP1P33241 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LSP1P33241 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LSP1P33241 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.05■□□□□ 0.8
LSP1P33241 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LSP1P33241 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
LSP1P33241 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LSP1P33241 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.05■□□□□ 0.8
LSP1P33241 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
LSP1P33241 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LSP1P33241 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LSP1P33241 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LSP1P33241 SYT6-210ENST00000641643 1587 ntBASIC20.04■□□□□ 0.8
LSP1P33241 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.04■□□□□ 0.8
LSP1P33241 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LSP1P33241 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
LSP1P33241 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
LSP1P33241 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
LSP1P33241 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.04■□□□□ 0.8
LSP1P33241 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LSP1P33241 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms