Protein–RNA interactions for Protein: P32561

RPD3, Histone deacetylase RPD3, yeastyeast

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPD3P32561 KIP1YBL063W 3336 nt1.85□□□□□ -2.11
RPD3P32561 YCS4YLR272C 3531 nt1.84□□□□□ -2.11
RPD3P32561 SAC3YDR159W 3906 nt1.84□□□□□ -2.11
RPD3P32561 YAL067W-AYAL067W-A 228 nt1.84□□□□□ -2.11
RPD3P32561 TOR2YKL203C 7425 nt1.84□□□□□ -2.12
RPD3P32561 RAD50YNL250W 3939 nt1.84□□□□□ -2.12
RPD3P32561 PRP5YBR237W 2550 nt1.83□□□□□ -2.12
RPD3P32561 LHS1YKL073W 2646 nt1.82□□□□□ -2.12
RPD3P32561 YER172C-AYER172C-A 381 nt1.82□□□□□ -2.12
RPD3P32561 RSM22YKL155C 1887 nt1.82□□□□□ -2.12
RPD3P32561 UFD2YDL190C 2886 nt1.81□□□□□ -2.12
RPD3P32561 POL5YEL055C 3069 nt1.81□□□□□ -2.12
RPD3P32561 YLL054CYLL054C 2532 nt1.8□□□□□ -2.12
RPD3P32561 YKL100W-AYKL100W-A 90 nt1.8□□□□□ -2.12
RPD3P32561 SKI3YPR189W 4299 nt1.8□□□□□ -2.12
RPD3P32561 FKS1YLR342W 5631 nt1.79□□□□□ -2.12
RPD3P32561 GYP5YPL249C 2685 nt1.79□□□□□ -2.12
RPD3P32561 YLR422WYLR422W 5799 nt1.78□□□□□ -2.12
RPD3P32561 KCS1YDR017C 3153 nt1.78□□□□□ -2.12
RPD3P32561 YOR019WYOR019W 2193 nt1.78□□□□□ -2.13
RPD3P32561 YFR012W-AYFR012W-A 87 nt1.77□□□□□ -2.13
RPD3P32561 YCL001W-BYCL001W-B 255 nt1.77□□□□□ -2.13
RPD3P32561 UTP22YGR090W 3714 nt1.77□□□□□ -2.13
RPD3P32561 SLX4YLR135W 2247 nt1.76□□□□□ -2.13
RPD3P32561 TBS1YBR150C 3285 nt1.76□□□□□ -2.13
RPD3P32561 YGL123C-AYGL123C-A 231 nt1.76□□□□□ -2.13
RPD3P32561 tT(UGU)HtT(UGU)H 72 nt1.76□□□□□ -2.13
RPD3P32561 YMR247W-AYMR247W-A 144 nt1.76□□□□□ -2.13
RPD3P32561 UTP8YGR128C 2142 nt1.76□□□□□ -2.13
RPD3P32561 SMC1YFL008W 3678 nt1.76□□□□□ -2.13
RPD3P32561 YAR009CYAR009C 3591 nt1.75□□□□□ -2.13
RPD3P32561 YLL020CYLL020C 306 nt1.75□□□□□ -2.13
RPD3P32561 MYO2YOR326W 4725 nt1.74□□□□□ -2.13
RPD3P32561 COA6YMR244C-A 315 nt1.74□□□□□ -2.13
RPD3P32561 YER053C-AYER053C-A 114 nt1.73□□□□□ -2.13
RPD3P32561 COX5BYIL111W 456 nt1.73□□□□□ -2.13
RPD3P32561 CDC25YLR310C 4770 nt1.73□□□□□ -2.13
RPD3P32561 MDS3YGL197W 4464 nt1.72□□□□□ -2.13
RPD3P32561 BFR2YDR299W 1605 nt1.72□□□□□ -2.13
RPD3P32561 CHS6YJL099W 2241 nt1.71□□□□□ -2.14
RPD3P32561 tL(UAA)QtL(UAA)Q 85 nt1.71□□□□□ -2.14
RPD3P32561 YGL182CYGL182C 324 nt1.71□□□□□ -2.14
RPD3P32561 YOR093CYOR093C 4947 nt1.71□□□□□ -2.14
RPD3P32561 SMC4YLR086W 4257 nt1.7□□□□□ -2.14
RPD3P32561 YLR282CYLR282C 342 nt1.7□□□□□ -2.14
RPD3P32561 CDC31YOR257W 486 nt1.7□□□□□ -2.14
RPD3P32561 EAF1YDR359C 2949 nt1.7□□□□□ -2.14
RPD3P32561 UBR2YLR024C 5619 nt1.7□□□□□ -2.14
RPD3P32561 YOR329W-AYOR329W-A 210 nt1.69□□□□□ -2.14
RPD3P32561 ROM2YLR371W 4071 nt1.69□□□□□ -2.14
RPD3P32561 YBR178WYBR178W 375 nt1.68□□□□□ -2.14
RPD3P32561 snR14snR14 160 nt1.67□□□□□ -2.14
RPD3P32561 YHR214C-BYHR214C-B 5382 nt1.67□□□□□ -2.14
RPD3P32561 KAP122YGL016W 3246 nt1.66□□□□□ -2.14
RPD3P32561 YCR095W-AYCR095W-A 159 nt1.66□□□□□ -2.14
RPD3P32561 PKH3YDR466W 2697 nt1.66□□□□□ -2.14
RPD3P32561 YML002WYML002W 2214 nt1.66□□□□□ -2.14
RPD3P32561 YDR524C-AYDR524C-A 120 nt1.65□□□□□ -2.15
RPD3P32561 CMC4YMR194C-B 222 nt1.65□□□□□ -2.15
RPD3P32561 RTP1YMR185W 2946 nt1.65□□□□□ -2.15
RPD3P32561 NOP9YJL010C 2001 nt1.64□□□□□ -2.15
RPD3P32561 CLU1YMR012W 3834 nt1.64□□□□□ -2.15
RPD3P32561 OST4YDL232W 111 nt1.64□□□□□ -2.15
RPD3P32561 YOR161W-AYOR161W-A 81 nt1.64□□□□□ -2.15
RPD3P32561 YBR099CYBR099C 384 nt1.64□□□□□ -2.15
RPD3P32561 STO1YMR125W 2586 nt1.64□□□□□ -2.15
RPD3P32561 SET3YKR029C 2256 nt1.64□□□□□ -2.15
RPD3P32561 YBL039C-AYBL039C-A 84 nt1.63□□□□□ -2.15
RPD3P32561 FAB1YFR019W 6837 nt1.62□□□□□ -2.15
RPD3P32561 WAR1YML076C 2835 nt1.62□□□□□ -2.15
RPD3P32561 SWI4YER111C 3282 nt1.62□□□□□ -2.15
RPD3P32561 IRC20YLR247C 4671 nt1.61□□□□□ -2.15
RPD3P32561 RPL26BYGR034W 384 nt1.61□□□□□ -2.15
RPD3P32561 NUP145YGL092W 3954 nt1.6□□□□□ -2.15
RPD3P32561 VPS15YBR097W 4365 nt1.59□□□□□ -2.15
RPD3P32561 BST1YFL025C 3090 nt1.59□□□□□ -2.15
RPD3P32561 TAH1YCR060W 336 nt1.59□□□□□ -2.15
RPD3P32561 YLR041WYLR041W 321 nt1.59□□□□□ -2.15
RPD3P32561 YNL067W-BYNL067W-B 141 nt1.59□□□□□ -2.15
RPD3P32561 APL3YBL037W 3078 nt1.59□□□□□ -2.16
RPD3P32561 STB6YKL072W 2301 nt1.58□□□□□ -2.16
RPD3P32561 RPM2YML091C 3609 nt1.58□□□□□ -2.16
RPD3P32561 SOM1YEL059C-A 225 nt1.58□□□□□ -2.16
RPD3P32561 ANS1YHR126C 480 nt1.58□□□□□ -2.16
RPD3P32561 YBR200W-AYBR200W-A 165 nt1.58□□□□□ -2.16
RPD3P32561 DNF3YMR162C 4971 nt1.57□□□□□ -2.16
RPD3P32561 CHS1YNL192W 3396 nt1.56□□□□□ -2.16
RPD3P32561 YDR544CYDR544C 429 nt1.56□□□□□ -2.16
RPD3P32561 YLR419WYLR419W 4308 nt1.55□□□□□ -2.16
RPD3P32561 QCR9YGR183C 201 nt1.55□□□□□ -2.16
RPD3P32561 YIL071W-AYIL071W-A 477 nt1.55□□□□□ -2.16
RPD3P32561 YMR326CYMR326C 309 nt1.55□□□□□ -2.16
RPD3P32561 snR190snR190 190 nt1.55□□□□□ -2.16
RPD3P32561 SEC3YER008C 4011 nt1.55□□□□□ -2.16
RPD3P32561 SEC21YNL287W 2808 nt1.54□□□□□ -2.16
RPD3P32561 PMP2YEL017C-A 132 nt1.54□□□□□ -2.16
RPD3P32561 STF2YGR008C 255 nt1.54□□□□□ -2.16
RPD3P32561 FYV10YIL097W 1551 nt1.54□□□□□ -2.16
RPD3P32561 TFB5YDR079C-A 219 nt1.53□□□□□ -2.16
RPD3P32561 YLR232WYLR232W 348 nt1.53□□□□□ -2.16
Retrieved 100 of 7,029 protein–RNA pairs in 56 ms