Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
GDF1P27539 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
GDF1P27539 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.18■□□□□ 0.5
GDF1P27539 AC093827.2-201ENST00000512654 315 ntBASIC18.18■□□□□ 0.5
GDF1P27539 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
GDF1P27539 RPPH1-201ENST00000516869 333 ntBASIC18.18■□□□□ 0.5
GDF1P27539 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.18■□□□□ 0.5
GDF1P27539 AP006294.2-201ENST00000641667 209 ntBASIC18.18■□□□□ 0.5
GDF1P27539 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GDF1P27539 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
GDF1P27539 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
GDF1P27539 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.17■□□□□ 0.5
GDF1P27539 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.17■□□□□ 0.5
GDF1P27539 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.17■□□□□ 0.5
GDF1P27539 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.17■□□□□ 0.5
GDF1P27539 PTBP1P-201ENST00000554374 1601 ntBASIC18.17■□□□□ 0.5
GDF1P27539 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.17■□□□□ 0.5
GDF1P27539 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GDF1P27539 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GDF1P27539 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.17■□□□□ 0.5
GDF1P27539 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
GDF1P27539 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
GDF1P27539 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
GDF1P27539 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
GDF1P27539 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.17■□□□□ 0.5
GDF1P27539 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.17■□□□□ 0.5
GDF1P27539 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GDF1P27539 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.17■□□□□ 0.5
GDF1P27539 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
GDF1P27539 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
GDF1P27539 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
GDF1P27539 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
GDF1P27539 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.17■□□□□ 0.5
GDF1P27539 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
GDF1P27539 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
GDF1P27539 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GDF1P27539 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
GDF1P27539 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GDF1P27539 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GDF1P27539 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GDF1P27539 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GDF1P27539 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
GDF1P27539 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.16■□□□□ 0.5
GDF1P27539 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
GDF1P27539 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
GDF1P27539 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.16■□□□□ 0.5
GDF1P27539 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GDF1P27539 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GDF1P27539 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
GDF1P27539 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GDF1P27539 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.16■□□□□ 0.5
GDF1P27539 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.16■□□□□ 0.5
GDF1P27539 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
GDF1P27539 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
GDF1P27539 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
GDF1P27539 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.15■□□□□ 0.5
GDF1P27539 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.15■□□□□ 0.5
GDF1P27539 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.15■□□□□ 0.5
GDF1P27539 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
GDF1P27539 AC239809.2-201ENST00000415381 517 ntBASIC18.15■□□□□ 0.5
GDF1P27539 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.15■□□□□ 0.5
GDF1P27539 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.15■□□□□ 0.5
GDF1P27539 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.15■□□□□ 0.5
GDF1P27539 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.15■□□□□ 0.5
GDF1P27539 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.15■□□□□ 0.5
GDF1P27539 PRKY-204ENST00000533551 1019 ntBASIC18.15■□□□□ 0.5
GDF1P27539 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
GDF1P27539 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.15■□□□□ 0.5
GDF1P27539 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
GDF1P27539 MTDHP1-201ENST00000605323 784 ntBASIC18.15■□□□□ 0.5
GDF1P27539 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GDF1P27539 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.15■□□□□ 0.5
GDF1P27539 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
GDF1P27539 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GDF1P27539 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
GDF1P27539 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.15■□□□□ 0.5
GDF1P27539 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
GDF1P27539 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
GDF1P27539 KRT8P17-201ENST00000453110 1448 ntBASIC18.15■□□□□ 0.5
GDF1P27539 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.14■□□□□ 0.5
GDF1P27539 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
GDF1P27539 AC124283.5-201ENST00000624661 1809 ntBASIC18.14■□□□□ 0.5
GDF1P27539 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.14■□□□□ 0.49
GDF1P27539 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
GDF1P27539 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.14■□□□□ 0.49
GDF1P27539 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
GDF1P27539 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
GDF1P27539 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
GDF1P27539 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
GDF1P27539 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
GDF1P27539 UBE2SP1-201ENST00000450587 669 ntBASIC18.14■□□□□ 0.49
GDF1P27539 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.14■□□□□ 0.49
GDF1P27539 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
GDF1P27539 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.14■□□□□ 0.49
GDF1P27539 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.14■□□□□ 0.49
GDF1P27539 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.14■□□□□ 0.49
GDF1P27539 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
GDF1P27539 AL023875.1-201ENST00000640777 796 ntBASIC18.14■□□□□ 0.49
GDF1P27539 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
GDF1P27539 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms