Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
MMP11P24347 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
MMP11P24347 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.01■□□□□ 0.63
MMP11P24347 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MMP11P24347 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MMP11P24347 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MMP11P24347 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
MMP11P24347 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MMP11P24347 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
MMP11P24347 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
MMP11P24347 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
MMP11P24347 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
MMP11P24347 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.01■□□□□ 0.63
MMP11P24347 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.01■□□□□ 0.63
MMP11P24347 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.01■□□□□ 0.63
MMP11P24347 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MMP11P24347 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MMP11P24347 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MMP11P24347 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MMP11P24347 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
MMP11P24347 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MMP11P24347 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
MMP11P24347 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MMP11P24347 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
MMP11P24347 AC027702.1-201ENST00000563810 1770 ntBASIC19.01■□□□□ 0.63
MMP11P24347 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
MMP11P24347 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19■□□□□ 0.63
MMP11P24347 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
MMP11P24347 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MMP11P24347 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19■□□□□ 0.63
MMP11P24347 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
MMP11P24347 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19■□□□□ 0.63
MMP11P24347 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
MMP11P24347 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
MMP11P24347 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
MMP11P24347 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19■□□□□ 0.63
MMP11P24347 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
MMP11P24347 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
MMP11P24347 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19■□□□□ 0.63
MMP11P24347 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19■□□□□ 0.63
MMP11P24347 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MMP11P24347 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MMP11P24347 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MMP11P24347 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MMP11P24347 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19■□□□□ 0.63
MMP11P24347 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MMP11P24347 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MMP11P24347 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MMP11P24347 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.99■□□□□ 0.63
MMP11P24347 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.99■□□□□ 0.63
MMP11P24347 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MMP11P24347 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MMP11P24347 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
MMP11P24347 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.99■□□□□ 0.63
MMP11P24347 POM121L13P-201ENST00000422362 380 ntBASIC18.99■□□□□ 0.63
MMP11P24347 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
MMP11P24347 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.99■□□□□ 0.63
MMP11P24347 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.99■□□□□ 0.63
MMP11P24347 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.99■□□□□ 0.63
MMP11P24347 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.99■□□□□ 0.63
MMP11P24347 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
MMP11P24347 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MMP11P24347 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
MMP11P24347 AC007225.1-201ENST00000566331 1836 ntBASIC18.99■□□□□ 0.63
MMP11P24347 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MMP11P24347 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
MMP11P24347 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.99■□□□□ 0.63
MMP11P24347 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MMP11P24347 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
MMP11P24347 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MMP11P24347 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MMP11P24347 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MMP11P24347 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.98■□□□□ 0.63
MMP11P24347 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MMP11P24347 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
MMP11P24347 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MMP11P24347 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.98■□□□□ 0.63
MMP11P24347 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
MMP11P24347 AC005829.2-201ENST00000571422 1056 ntBASIC18.98■□□□□ 0.63
MMP11P24347 RN7SL471P-201ENST00000580476 299 ntBASIC18.98■□□□□ 0.63
MMP11P24347 AC069544.1-201ENST00000609399 999 ntBASIC18.98■□□□□ 0.63
MMP11P24347 AL359736.2-201ENST00000621992 437 ntBASIC18.98■□□□□ 0.63
MMP11P24347 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
MMP11P24347 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MMP11P24347 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
MMP11P24347 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.98■□□□□ 0.63
MMP11P24347 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MMP11P24347 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.98■□□□□ 0.63
MMP11P24347 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.98■□□□□ 0.63
MMP11P24347 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
MMP11P24347 AL391422.3-201ENST00000603791 2761 ntBASIC18.98■□□□□ 0.63
MMP11P24347 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
MMP11P24347 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
MMP11P24347 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.97■□□□□ 0.63
MMP11P24347 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
MMP11P24347 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
MMP11P24347 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.97■□□□□ 0.63
MMP11P24347 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
MMP11P24347 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
MMP11P24347 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms