Protein–RNA interactions for Protein: P20448

HCA4, ATP-dependent RNA helicase HCA4, yeastyeast

Known RBP Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HCA4P20448 YHR214C-BYHR214C-B 5382 nt1.95□□□□□ -2.1
HCA4P20448 SLD3YGL113W 2007 nt1.95□□□□□ -2.1
HCA4P20448 RTP1YMR185W 2946 nt1.94□□□□□ -2.1
HCA4P20448 MYO2YOR326W 4725 nt1.94□□□□□ -2.1
HCA4P20448 YOR093CYOR093C 4947 nt1.94□□□□□ -2.1
HCA4P20448 FRK1YPL141C 2598 nt1.94□□□□□ -2.1
HCA4P20448 YDR521WYDR521W 336 nt1.94□□□□□ -2.1
HCA4P20448 PMP2YEL017C-A 132 nt1.94□□□□□ -2.1
HCA4P20448 YBR206WYBR206W 324 nt1.94□□□□□ -2.1
HCA4P20448 SFB2YNL049C 2631 nt1.93□□□□□ -2.1
HCA4P20448 COX12YLR038C 252 nt1.93□□□□□ -2.1
HCA4P20448 YNL144CYNL144C 2223 nt1.93□□□□□ -2.1
HCA4P20448 YCR038W-AYCR038W-A 126 nt1.92□□□□□ -2.1
HCA4P20448 NUT1YGL151W 3399 nt1.92□□□□□ -2.1
HCA4P20448 YLR035C-AYLR035C-A 3468 nt1.92□□□□□ -2.1
HCA4P20448 UTP21YLR409C 2820 nt1.91□□□□□ -2.1
HCA4P20448 TRM3YDL112W 4311 nt1.91□□□□□ -2.1
HCA4P20448 SKI3YPR189W 4299 nt1.91□□□□□ -2.1
HCA4P20448 CTF4YPR135W 2784 nt1.91□□□□□ -2.1
HCA4P20448 YJL026C-AYJL026C-A 222 nt1.91□□□□□ -2.1
HCA4P20448 YMR247W-AYMR247W-A 144 nt1.91□□□□□ -2.1
HCA4P20448 LHS1YKL073W 2646 nt1.91□□□□□ -2.1
HCA4P20448 VPS15YBR097W 4365 nt1.9□□□□□ -2.11
HCA4P20448 COA6YMR244C-A 315 nt1.9□□□□□ -2.11
HCA4P20448 EMC5YIL027C 426 nt1.89□□□□□ -2.11
HCA4P20448 ALK1YGL021W 2283 nt1.89□□□□□ -2.11
HCA4P20448 PBY1YBR094W 2262 nt1.89□□□□□ -2.11
HCA4P20448 BRR2YER172C 6492 nt1.89□□□□□ -2.11
HCA4P20448 MYO4YAL029C 4416 nt1.88□□□□□ -2.11
HCA4P20448 YBR099CYBR099C 384 nt1.88□□□□□ -2.11
HCA4P20448 CFT1YDR301W 4074 nt1.88□□□□□ -2.11
HCA4P20448 YCR095W-AYCR095W-A 159 nt1.87□□□□□ -2.11
HCA4P20448 YMR175W-AYMR175W-A 195 nt1.87□□□□□ -2.11
HCA4P20448 PTP2YOR208W 2253 nt1.86□□□□□ -2.11
HCA4P20448 NUP157YER105C 4176 nt1.85□□□□□ -2.11
HCA4P20448 OST4YDL232W 111 nt1.85□□□□□ -2.11
HCA4P20448 snR61snR61 90 nt1.84□□□□□ -2.11
HCA4P20448 YDL247W-AYDL247W-A 75 nt1.84□□□□□ -2.11
HCA4P20448 tT(UGU)HtT(UGU)H 72 nt1.84□□□□□ -2.11
HCA4P20448 YLL054CYLL054C 2532 nt1.83□□□□□ -2.12
HCA4P20448 MEC1YBR136W 7107 nt1.83□□□□□ -2.12
HCA4P20448 YNL211CYNL211C 261 nt1.83□□□□□ -2.12
HCA4P20448 ALY2YJL084C 3141 nt1.83□□□□□ -2.12
HCA4P20448 SPO24YPR036W-A 204 nt1.82□□□□□ -2.12
HCA4P20448 YIL002W-AYIL002W-A 210 nt1.81□□□□□ -2.12
HCA4P20448 YNL067W-BYNL067W-B 141 nt1.81□□□□□ -2.12
HCA4P20448 COG4YPR105C 2586 nt1.81□□□□□ -2.12
HCA4P20448 PKH3YDR466W 2697 nt1.81□□□□□ -2.12
HCA4P20448 SLI15YBR156C 2097 nt1.8□□□□□ -2.12
HCA4P20448 CMC4YMR194C-B 222 nt1.8□□□□□ -2.12
HCA4P20448 TTI1YKL033W 3117 nt1.8□□□□□ -2.12
HCA4P20448 KAP122YGL016W 3246 nt1.8□□□□□ -2.12
HCA4P20448 IRA1YBR140C 9279 nt1.8□□□□□ -2.12
HCA4P20448 STB6YKL072W 2301 nt1.79□□□□□ -2.12
HCA4P20448 YLR282CYLR282C 342 nt1.79□□□□□ -2.12
HCA4P20448 YOR019WYOR019W 2193 nt1.79□□□□□ -2.12
HCA4P20448 SBE22YHR103W 2559 nt1.79□□□□□ -2.12
HCA4P20448 UFD2YDL190C 2886 nt1.79□□□□□ -2.12
HCA4P20448 NUP192YJL039C 5052 nt1.79□□□□□ -2.12
HCA4P20448 PKH2YOL100W 3246 nt1.78□□□□□ -2.12
HCA4P20448 PRP5YBR237W 2550 nt1.78□□□□□ -2.12
HCA4P20448 YLR422WYLR422W 5799 nt1.78□□□□□ -2.13
HCA4P20448 SBH1YER087C-B 249 nt1.77□□□□□ -2.13
HCA4P20448 POL5YEL055C 3069 nt1.76□□□□□ -2.13
HCA4P20448 RCO1YMR075W 2055 nt1.75□□□□□ -2.13
HCA4P20448 PAN2YGL094C 3348 nt1.74□□□□□ -2.13
HCA4P20448 YGL182CYGL182C 324 nt1.74□□□□□ -2.13
HCA4P20448 MYO1YHR023W 5787 nt1.74□□□□□ -2.13
HCA4P20448 EAF1YDR359C 2949 nt1.74□□□□□ -2.13
HCA4P20448 CHS6YJL099W 2241 nt1.74□□□□□ -2.13
HCA4P20448 APL1YJR005W 2103 nt1.73□□□□□ -2.13
HCA4P20448 CAT8YMR280C 4302 nt1.73□□□□□ -2.13
HCA4P20448 snR39BsnR39B 96 nt1.73□□□□□ -2.13
HCA4P20448 RAD50YNL250W 3939 nt1.73□□□□□ -2.13
HCA4P20448 CLU1YMR012W 3834 nt1.73□□□□□ -2.13
HCA4P20448 PIK1YNL267W 3201 nt1.72□□□□□ -2.13
HCA4P20448 SOM1YEL059C-A 225 nt1.72□□□□□ -2.13
HCA4P20448 YAL067W-AYAL067W-A 228 nt1.72□□□□□ -2.13
HCA4P20448 DNF3YMR162C 4971 nt1.72□□□□□ -2.13
HCA4P20448 YGL041C-BYGL041C-B 183 nt1.71□□□□□ -2.14
HCA4P20448 YHR131W-AYHR131W-A 246 nt1.71□□□□□ -2.14
HCA4P20448 YDL206WYDL206W 2289 nt1.71□□□□□ -2.14
HCA4P20448 SLX4YLR135W 2247 nt1.7□□□□□ -2.14
HCA4P20448 YBL039C-AYBL039C-A 84 nt1.7□□□□□ -2.14
HCA4P20448 YOR161W-AYOR161W-A 81 nt1.7□□□□□ -2.14
HCA4P20448 BFR2YDR299W 1605 nt1.69□□□□□ -2.14
HCA4P20448 COG6YNL041C 2520 nt1.69□□□□□ -2.14
HCA4P20448 SSK2YNR031C 4740 nt1.69□□□□□ -2.14
HCA4P20448 MON2YNL297C 4911 nt1.69□□□□□ -2.14
HCA4P20448 YGL123C-AYGL123C-A 231 nt1.68□□□□□ -2.14
HCA4P20448 BST1YFL025C 3090 nt1.68□□□□□ -2.14
HCA4P20448 ROM2YLR371W 4071 nt1.68□□□□□ -2.14
HCA4P20448 TRM732YMR259C 4263 nt1.67□□□□□ -2.14
HCA4P20448 MMS4YBR098W 2076 nt1.67□□□□□ -2.14
HCA4P20448 QCR9YGR183C 201 nt1.66□□□□□ -2.14
HCA4P20448 SMC4YLR086W 4257 nt1.65□□□□□ -2.15
HCA4P20448 STF2YGR008C 255 nt1.64□□□□□ -2.15
HCA4P20448 YIL142C-AYIL142C-A 333 nt1.64□□□□□ -2.15
HCA4P20448 YLL020CYLL020C 306 nt1.64□□□□□ -2.15
HCA4P20448 FIG2YCR089W 4830 nt1.64□□□□□ -2.15
Retrieved 100 of 7,029 protein–RNA pairs in 11.7 ms