Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
XRCC1P18887 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.94■□□□□ 0.78
XRCC1P18887 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.94■□□□□ 0.78
XRCC1P18887 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
XRCC1P18887 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.94■□□□□ 0.78
XRCC1P18887 TSPY20P-201ENST00000450910 630 ntBASIC19.94■□□□□ 0.78
XRCC1P18887 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.94■□□□□ 0.78
XRCC1P18887 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.94■□□□□ 0.78
XRCC1P18887 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.94■□□□□ 0.78
XRCC1P18887 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
XRCC1P18887 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
XRCC1P18887 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
XRCC1P18887 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
XRCC1P18887 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.94■□□□□ 0.78
XRCC1P18887 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.94■□□□□ 0.78
XRCC1P18887 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.94■□□□□ 0.78
XRCC1P18887 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
XRCC1P18887 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
XRCC1P18887 AC020907.5-201ENST00000624372 1936 ntBASIC19.94■□□□□ 0.78
XRCC1P18887 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
XRCC1P18887 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
XRCC1P18887 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
XRCC1P18887 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
XRCC1P18887 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.93■□□□□ 0.78
XRCC1P18887 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
XRCC1P18887 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
XRCC1P18887 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.93■□□□□ 0.78
XRCC1P18887 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
XRCC1P18887 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
XRCC1P18887 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
XRCC1P18887 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.93■□□□□ 0.78
XRCC1P18887 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
XRCC1P18887 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
XRCC1P18887 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
XRCC1P18887 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
XRCC1P18887 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
XRCC1P18887 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
XRCC1P18887 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
XRCC1P18887 PGM5P4-201ENST00000421970 445 ntBASIC19.93■□□□□ 0.78
XRCC1P18887 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.93■□□□□ 0.78
XRCC1P18887 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.93■□□□□ 0.78
XRCC1P18887 MIR4651-201ENST00000582622 73 ntBASIC19.93■□□□□ 0.78
XRCC1P18887 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.93■□□□□ 0.78
XRCC1P18887 AC105020.6-201ENST00000621523 1217 ntBASIC19.93■□□□□ 0.78
XRCC1P18887 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.93■□□□□ 0.78
XRCC1P18887 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
XRCC1P18887 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
XRCC1P18887 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.93■□□□□ 0.78
XRCC1P18887 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.93■□□□□ 0.78
XRCC1P18887 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
XRCC1P18887 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
XRCC1P18887 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
XRCC1P18887 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
XRCC1P18887 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
XRCC1P18887 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
XRCC1P18887 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
XRCC1P18887 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
XRCC1P18887 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.92■□□□□ 0.78
XRCC1P18887 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.92■□□□□ 0.78
XRCC1P18887 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.92■□□□□ 0.78
XRCC1P18887 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.92■□□□□ 0.78
XRCC1P18887 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.92■□□□□ 0.78
XRCC1P18887 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.92■□□□□ 0.78
XRCC1P18887 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
XRCC1P18887 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
XRCC1P18887 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
XRCC1P18887 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
XRCC1P18887 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.92■□□□□ 0.78
XRCC1P18887 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
XRCC1P18887 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.92■□□□□ 0.78
XRCC1P18887 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.91■□□□□ 0.78
XRCC1P18887 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.91■□□□□ 0.78
XRCC1P18887 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
XRCC1P18887 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.91■□□□□ 0.78
XRCC1P18887 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
XRCC1P18887 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.91■□□□□ 0.78
XRCC1P18887 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
XRCC1P18887 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.91■□□□□ 0.78
XRCC1P18887 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
XRCC1P18887 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
XRCC1P18887 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
XRCC1P18887 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
XRCC1P18887 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
XRCC1P18887 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
XRCC1P18887 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
XRCC1P18887 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
XRCC1P18887 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
XRCC1P18887 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.9■□□□□ 0.78
XRCC1P18887 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
XRCC1P18887 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.9■□□□□ 0.78
XRCC1P18887 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
XRCC1P18887 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
XRCC1P18887 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
XRCC1P18887 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
XRCC1P18887 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.9■□□□□ 0.78
XRCC1P18887 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
XRCC1P18887 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
XRCC1P18887 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
XRCC1P18887 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.9■□□□□ 0.78
XRCC1P18887 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms