Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ERCC2P18074 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
ERCC2P18074 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.64■□□□□ 0.89
ERCC2P18074 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
ERCC2P18074 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.64■□□□□ 0.89
ERCC2P18074 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
ERCC2P18074 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ERCC2P18074 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.64■□□□□ 0.89
ERCC2P18074 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
ERCC2P18074 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
ERCC2P18074 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
ERCC2P18074 TCF3P1-201ENST00000423021 1937 ntBASIC20.63■□□□□ 0.89
ERCC2P18074 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.63■□□□□ 0.89
ERCC2P18074 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ERCC2P18074 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ERCC2P18074 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.63■□□□□ 0.89
ERCC2P18074 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
ERCC2P18074 AC083880.1-201ENST00000608266 535 ntBASIC20.63■□□□□ 0.89
ERCC2P18074 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ERCC2P18074 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.63■□□□□ 0.89
ERCC2P18074 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.63■□□□□ 0.89
ERCC2P18074 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ERCC2P18074 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ERCC2P18074 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ERCC2P18074 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ERCC2P18074 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.63■□□□□ 0.89
ERCC2P18074 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ERCC2P18074 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
ERCC2P18074 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ERCC2P18074 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ERCC2P18074 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ERCC2P18074 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ERCC2P18074 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
ERCC2P18074 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
ERCC2P18074 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.62■□□□□ 0.89
ERCC2P18074 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ERCC2P18074 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ERCC2P18074 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ERCC2P18074 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
ERCC2P18074 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.62■□□□□ 0.89
ERCC2P18074 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ERCC2P18074 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.62■□□□□ 0.89
ERCC2P18074 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ERCC2P18074 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ERCC2P18074 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
ERCC2P18074 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ERCC2P18074 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
ERCC2P18074 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ERCC2P18074 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ERCC2P18074 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ERCC2P18074 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
ERCC2P18074 AL691432.2-201ENST00000607222 2038 ntBASIC20.61■□□□□ 0.89
ERCC2P18074 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ERCC2P18074 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ERCC2P18074 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
ERCC2P18074 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.61■□□□□ 0.89
ERCC2P18074 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ERCC2P18074 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ERCC2P18074 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ERCC2P18074 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ERCC2P18074 HLA-G-202ENST00000376815 851 ntBASIC20.61■□□□□ 0.89
ERCC2P18074 HLA-G-203ENST00000376818 1127 ntBASIC20.61■□□□□ 0.89
ERCC2P18074 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ERCC2P18074 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ERCC2P18074 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.61■□□□□ 0.89
ERCC2P18074 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.61■□□□□ 0.89
ERCC2P18074 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.61■□□□□ 0.89
ERCC2P18074 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.61■□□□□ 0.89
ERCC2P18074 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.61■□□□□ 0.89
ERCC2P18074 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.61■□□□□ 0.89
ERCC2P18074 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ERCC2P18074 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.61■□□□□ 0.89
ERCC2P18074 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.6■□□□□ 0.89
ERCC2P18074 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ERCC2P18074 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
ERCC2P18074 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.6■□□□□ 0.89
ERCC2P18074 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ERCC2P18074 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
ERCC2P18074 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.6■□□□□ 0.89
ERCC2P18074 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ERCC2P18074 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ERCC2P18074 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ERCC2P18074 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.6■□□□□ 0.89
ERCC2P18074 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ERCC2P18074 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ERCC2P18074 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ERCC2P18074 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ERCC2P18074 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.6■□□□□ 0.89
ERCC2P18074 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.6■□□□□ 0.89
ERCC2P18074 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ERCC2P18074 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ERCC2P18074 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.6■□□□□ 0.89
ERCC2P18074 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ERCC2P18074 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
ERCC2P18074 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.59■□□□□ 0.89
ERCC2P18074 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ERCC2P18074 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ERCC2P18074 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
ERCC2P18074 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.59■□□□□ 0.89
ERCC2P18074 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms