Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.5■□□□□ 0.55
UBL4AP11441 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.5■□□□□ 0.55
UBL4AP11441 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
UBL4AP11441 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
UBL4AP11441 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
UBL4AP11441 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
UBL4AP11441 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
UBL4AP11441 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
UBL4AP11441 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
UBL4AP11441 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UBL4AP11441 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
UBL4AP11441 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.49■□□□□ 0.55
UBL4AP11441 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
UBL4AP11441 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.49■□□□□ 0.55
UBL4AP11441 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
UBL4AP11441 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UBL4AP11441 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
UBL4AP11441 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.49■□□□□ 0.55
UBL4AP11441 AL121832.2-201ENST00000610979 668 ntBASIC18.49■□□□□ 0.55
UBL4AP11441 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UBL4AP11441 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
UBL4AP11441 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
UBL4AP11441 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UBL4AP11441 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UBL4AP11441 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.49■□□□□ 0.55
UBL4AP11441 KRT17P1-201ENST00000399211 1546 ntBASIC18.49■□□□□ 0.55
UBL4AP11441 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.49■□□□□ 0.55
UBL4AP11441 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UBL4AP11441 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
UBL4AP11441 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
UBL4AP11441 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBL4AP11441 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.48■□□□□ 0.55
UBL4AP11441 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
UBL4AP11441 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBL4AP11441 LSM12P1-201ENST00000411836 588 ntBASIC18.48■□□□□ 0.55
UBL4AP11441 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.48■□□□□ 0.55
UBL4AP11441 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.48■□□□□ 0.55
UBL4AP11441 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.48■□□□□ 0.55
UBL4AP11441 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBL4AP11441 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.48■□□□□ 0.55
UBL4AP11441 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
UBL4AP11441 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.48■□□□□ 0.55
UBL4AP11441 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.48■□□□□ 0.55
UBL4AP11441 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBL4AP11441 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
UBL4AP11441 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBL4AP11441 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
UBL4AP11441 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBL4AP11441 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBL4AP11441 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
UBL4AP11441 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBL4AP11441 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.47■□□□□ 0.55
UBL4AP11441 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
UBL4AP11441 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.47■□□□□ 0.55
UBL4AP11441 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.47■□□□□ 0.55
UBL4AP11441 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.47■□□□□ 0.55
UBL4AP11441 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
UBL4AP11441 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBL4AP11441 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.47■□□□□ 0.55
UBL4AP11441 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
UBL4AP11441 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.47■□□□□ 0.55
UBL4AP11441 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBL4AP11441 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
UBL4AP11441 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.46■□□□□ 0.55
UBL4AP11441 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.46■□□□□ 0.55
UBL4AP11441 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.46■□□□□ 0.55
UBL4AP11441 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBL4AP11441 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.46■□□□□ 0.55
UBL4AP11441 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
UBL4AP11441 BX276092.2-201ENST00000417668 665 ntBASIC18.46■□□□□ 0.55
UBL4AP11441 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.46■□□□□ 0.55
UBL4AP11441 AC083906.2-201ENST00000511578 360 ntBASIC18.46■□□□□ 0.55
UBL4AP11441 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.46■□□□□ 0.55
UBL4AP11441 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.46■□□□□ 0.55
UBL4AP11441 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBL4AP11441 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.46■□□□□ 0.55
UBL4AP11441 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.46■□□□□ 0.55
UBL4AP11441 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
UBL4AP11441 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
UBL4AP11441 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.46■□□□□ 0.55
UBL4AP11441 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.46■□□□□ 0.55
UBL4AP11441 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBL4AP11441 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.46■□□□□ 0.55
UBL4AP11441 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
UBL4AP11441 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.46■□□□□ 0.55
UBL4AP11441 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
UBL4AP11441 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.46■□□□□ 0.55
UBL4AP11441 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
UBL4AP11441 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBL4AP11441 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBL4AP11441 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
UBL4AP11441 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.46■□□□□ 0.54
UBL4AP11441 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
UBL4AP11441 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
UBL4AP11441 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
UBL4AP11441 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
UBL4AP11441 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
UBL4AP11441 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UBL4AP11441 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
UBL4AP11441 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms