Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.22■□□□□ 0.51
FREM3P0C091 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
FREM3P0C091 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
FREM3P0C091 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
FREM3P0C091 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
FREM3P0C091 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.22■□□□□ 0.51
FREM3P0C091 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
FREM3P0C091 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
FREM3P0C091 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
FREM3P0C091 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
FREM3P0C091 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
FREM3P0C091 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.22■□□□□ 0.51
FREM3P0C091 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
FREM3P0C091 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
FREM3P0C091 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.22■□□□□ 0.51
FREM3P0C091 AC120498.8-201ENST00000614275 531 ntBASIC18.22■□□□□ 0.51
FREM3P0C091 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
FREM3P0C091 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.22■□□□□ 0.51
FREM3P0C091 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.21■□□□□ 0.51
FREM3P0C091 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
FREM3P0C091 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
FREM3P0C091 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
FREM3P0C091 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.21■□□□□ 0.51
FREM3P0C091 AC005829.2-201ENST00000571422 1056 ntBASIC18.21■□□□□ 0.51
FREM3P0C091 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.21■□□□□ 0.51
FREM3P0C091 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.21■□□□□ 0.51
FREM3P0C091 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.21■□□□□ 0.51
FREM3P0C091 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
FREM3P0C091 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.21■□□□□ 0.51
FREM3P0C091 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.21■□□□□ 0.51
FREM3P0C091 GABARAPL3-202ENST00000624044 1851 ntBASIC18.21■□□□□ 0.51
FREM3P0C091 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
FREM3P0C091 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
FREM3P0C091 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
FREM3P0C091 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
FREM3P0C091 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
FREM3P0C091 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.21■□□□□ 0.5
FREM3P0C091 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FREM3P0C091 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
FREM3P0C091 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
FREM3P0C091 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
FREM3P0C091 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
FREM3P0C091 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
FREM3P0C091 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
FREM3P0C091 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.2■□□□□ 0.5
FREM3P0C091 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.2■□□□□ 0.5
FREM3P0C091 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
FREM3P0C091 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.2■□□□□ 0.5
FREM3P0C091 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.2■□□□□ 0.5
FREM3P0C091 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
FREM3P0C091 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.2■□□□□ 0.5
FREM3P0C091 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.2■□□□□ 0.5
FREM3P0C091 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FREM3P0C091 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FREM3P0C091 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
FREM3P0C091 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FREM3P0C091 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.2■□□□□ 0.5
FREM3P0C091 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FREM3P0C091 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.2■□□□□ 0.5
FREM3P0C091 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
FREM3P0C091 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
FREM3P0C091 PKD1P6-201ENST00000343738 4769 ntBASIC18.2■□□□□ 0.5
FREM3P0C091 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FREM3P0C091 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FREM3P0C091 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.2■□□□□ 0.5
FREM3P0C091 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
FREM3P0C091 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
FREM3P0C091 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.2■□□□□ 0.5
FREM3P0C091 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.2■□□□□ 0.5
FREM3P0C091 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.2■□□□□ 0.5
FREM3P0C091 AC073648.6-201ENST00000641589 218 ntBASIC18.2■□□□□ 0.5
FREM3P0C091 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FREM3P0C091 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.2■□□□□ 0.5
FREM3P0C091 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
FREM3P0C091 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.2■□□□□ 0.5
FREM3P0C091 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
FREM3P0C091 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
FREM3P0C091 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
FREM3P0C091 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.19■□□□□ 0.5
FREM3P0C091 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
FREM3P0C091 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
FREM3P0C091 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
FREM3P0C091 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
FREM3P0C091 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
FREM3P0C091 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.19■□□□□ 0.5
FREM3P0C091 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.19■□□□□ 0.5
FREM3P0C091 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
FREM3P0C091 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FREM3P0C091 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
FREM3P0C091 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FREM3P0C091 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
FREM3P0C091 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.19■□□□□ 0.5
FREM3P0C091 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.19■□□□□ 0.5
FREM3P0C091 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.19■□□□□ 0.5
FREM3P0C091 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.19■□□□□ 0.5
FREM3P0C091 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FREM3P0C091 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FREM3P0C091 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.18■□□□□ 0.5
FREM3P0C091 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
FREM3P0C091 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms