Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
HOXC4P09017 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HOXC4P09017 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
HOXC4P09017 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HOXC4P09017 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.62■□□□□ 0.73
HOXC4P09017 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HOXC4P09017 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.62■□□□□ 0.73
HOXC4P09017 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.62■□□□□ 0.73
HOXC4P09017 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HOXC4P09017 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HOXC4P09017 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.62■□□□□ 0.73
HOXC4P09017 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
HOXC4P09017 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.62■□□□□ 0.73
HOXC4P09017 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.62■□□□□ 0.73
HOXC4P09017 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.62■□□□□ 0.73
HOXC4P09017 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HOXC4P09017 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
HOXC4P09017 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HOXC4P09017 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.62■□□□□ 0.73
HOXC4P09017 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HOXC4P09017 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HOXC4P09017 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HOXC4P09017 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HOXC4P09017 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HOXC4P09017 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
HOXC4P09017 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HOXC4P09017 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HOXC4P09017 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
HOXC4P09017 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HOXC4P09017 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
HOXC4P09017 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HOXC4P09017 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
HOXC4P09017 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
HOXC4P09017 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.61■□□□□ 0.73
HOXC4P09017 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
HOXC4P09017 MIR4497-201ENST00000583208 89 ntBASIC19.61■□□□□ 0.73
HOXC4P09017 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HOXC4P09017 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.61■□□□□ 0.73
HOXC4P09017 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
HOXC4P09017 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.61■□□□□ 0.73
HOXC4P09017 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
HOXC4P09017 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HOXC4P09017 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.61■□□□□ 0.73
HOXC4P09017 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
HOXC4P09017 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HOXC4P09017 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HOXC4P09017 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.6■□□□□ 0.73
HOXC4P09017 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
HOXC4P09017 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HOXC4P09017 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.6■□□□□ 0.73
HOXC4P09017 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.6■□□□□ 0.73
HOXC4P09017 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
HOXC4P09017 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HOXC4P09017 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
HOXC4P09017 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HOXC4P09017 AC004264.1-201ENST00000608354 794 ntBASIC19.6■□□□□ 0.73
HOXC4P09017 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
HOXC4P09017 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
HOXC4P09017 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
HOXC4P09017 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
HOXC4P09017 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
HOXC4P09017 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.59■□□□□ 0.73
HOXC4P09017 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HOXC4P09017 AC116351.2-201ENST00000606540 1585 ntBASIC19.59■□□□□ 0.73
HOXC4P09017 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
HOXC4P09017 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HOXC4P09017 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.59■□□□□ 0.73
HOXC4P09017 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
HOXC4P09017 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.59■□□□□ 0.73
HOXC4P09017 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
HOXC4P09017 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
HOXC4P09017 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.59■□□□□ 0.73
HOXC4P09017 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HOXC4P09017 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.59■□□□□ 0.73
HOXC4P09017 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
HOXC4P09017 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
HOXC4P09017 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HOXC4P09017 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
HOXC4P09017 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
HOXC4P09017 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.58■□□□□ 0.73
HOXC4P09017 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
HOXC4P09017 AC007375.3-201ENST00000600936 2314 ntBASIC19.58■□□□□ 0.73
HOXC4P09017 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HOXC4P09017 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HOXC4P09017 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HOXC4P09017 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.73
HOXC4P09017 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.58■□□□□ 0.73
HOXC4P09017 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HOXC4P09017 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HOXC4P09017 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
HOXC4P09017 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
HOXC4P09017 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.58■□□□□ 0.72
HOXC4P09017 AL353807.1-201ENST00000427475 662 ntBASIC19.58■□□□□ 0.72
HOXC4P09017 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.58■□□□□ 0.72
HOXC4P09017 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.58■□□□□ 0.72
HOXC4P09017 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.58■□□□□ 0.72
HOXC4P09017 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.58■□□□□ 0.72
HOXC4P09017 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.58■□□□□ 0.72
HOXC4P09017 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
HOXC4P09017 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms