Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 KRT8P20-201ENST00000423953 1409 ntBASIC18.44■□□□□ 0.54
THBS1P07996 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
THBS1P07996 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
THBS1P07996 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.44■□□□□ 0.54
THBS1P07996 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
THBS1P07996 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
THBS1P07996 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
THBS1P07996 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
THBS1P07996 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.44■□□□□ 0.54
THBS1P07996 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
THBS1P07996 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
THBS1P07996 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
THBS1P07996 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.43■□□□□ 0.54
THBS1P07996 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
THBS1P07996 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.43■□□□□ 0.54
THBS1P07996 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
THBS1P07996 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
THBS1P07996 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
THBS1P07996 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.43■□□□□ 0.54
THBS1P07996 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
THBS1P07996 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.43■□□□□ 0.54
THBS1P07996 AC026185.1-201ENST00000445748 174 ntBASIC18.43■□□□□ 0.54
THBS1P07996 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.43■□□□□ 0.54
THBS1P07996 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.43■□□□□ 0.54
THBS1P07996 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.43■□□□□ 0.54
THBS1P07996 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.43■□□□□ 0.54
THBS1P07996 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.43■□□□□ 0.54
THBS1P07996 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.43■□□□□ 0.54
THBS1P07996 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.43■□□□□ 0.54
THBS1P07996 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.43■□□□□ 0.54
THBS1P07996 AC005181.1-201ENST00000604782 1256 ntBASIC18.43■□□□□ 0.54
THBS1P07996 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.43■□□□□ 0.54
THBS1P07996 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
THBS1P07996 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
THBS1P07996 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
THBS1P07996 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.43■□□□□ 0.54
THBS1P07996 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
THBS1P07996 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
THBS1P07996 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
THBS1P07996 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
THBS1P07996 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
THBS1P07996 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
THBS1P07996 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
THBS1P07996 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
THBS1P07996 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.42■□□□□ 0.54
THBS1P07996 KRT16P6-202ENST00000425692 1426 ntBASIC18.42■□□□□ 0.54
THBS1P07996 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
THBS1P07996 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
THBS1P07996 AL355472.2-201ENST00000422958 438 ntBASIC18.42■□□□□ 0.54
THBS1P07996 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.42■□□□□ 0.54
THBS1P07996 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
THBS1P07996 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
THBS1P07996 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
THBS1P07996 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
THBS1P07996 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.42■□□□□ 0.54
THBS1P07996 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.42■□□□□ 0.54
THBS1P07996 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
THBS1P07996 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
THBS1P07996 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
THBS1P07996 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
THBS1P07996 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
THBS1P07996 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
THBS1P07996 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.41■□□□□ 0.54
THBS1P07996 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.41■□□□□ 0.54
THBS1P07996 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
THBS1P07996 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
THBS1P07996 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.41■□□□□ 0.54
THBS1P07996 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.41■□□□□ 0.54
THBS1P07996 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.41■□□□□ 0.54
THBS1P07996 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.41■□□□□ 0.54
THBS1P07996 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.41■□□□□ 0.54
THBS1P07996 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
THBS1P07996 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
THBS1P07996 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
THBS1P07996 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
THBS1P07996 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.41■□□□□ 0.54
THBS1P07996 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
THBS1P07996 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
THBS1P07996 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
THBS1P07996 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
THBS1P07996 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
THBS1P07996 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
THBS1P07996 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
THBS1P07996 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
THBS1P07996 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
THBS1P07996 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.4■□□□□ 0.54
THBS1P07996 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
THBS1P07996 AC125437.2-201ENST00000625180 2167 ntBASIC18.4■□□□□ 0.54
THBS1P07996 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
THBS1P07996 HLA-G-202ENST00000376815 851 ntBASIC18.4■□□□□ 0.54
THBS1P07996 HLA-G-203ENST00000376818 1127 ntBASIC18.4■□□□□ 0.54
THBS1P07996 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.4■□□□□ 0.54
THBS1P07996 CROCCP5-201ENST00000436658 830 ntBASIC18.4■□□□□ 0.54
THBS1P07996 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
THBS1P07996 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.4■□□□□ 0.54
THBS1P07996 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
THBS1P07996 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
THBS1P07996 AC133552.2-202ENST00000575694 574 ntBASIC18.4■□□□□ 0.54
THBS1P07996 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.4■□□□□ 0.54
THBS1P07996 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms