Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
PDGFAP04085 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PDGFAP04085 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.72■□□□□ 0.59
PDGFAP04085 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.72■□□□□ 0.59
PDGFAP04085 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
PDGFAP04085 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDGFAP04085 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.72■□□□□ 0.59
PDGFAP04085 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.72■□□□□ 0.59
PDGFAP04085 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDGFAP04085 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDGFAP04085 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.72■□□□□ 0.59
PDGFAP04085 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.72■□□□□ 0.59
PDGFAP04085 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDGFAP04085 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.72■□□□□ 0.59
PDGFAP04085 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.72■□□□□ 0.59
PDGFAP04085 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
PDGFAP04085 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDGFAP04085 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.72■□□□□ 0.59
PDGFAP04085 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDGFAP04085 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDGFAP04085 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDGFAP04085 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.71■□□□□ 0.59
PDGFAP04085 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
PDGFAP04085 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
PDGFAP04085 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
PDGFAP04085 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDGFAP04085 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PDGFAP04085 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDGFAP04085 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.71■□□□□ 0.59
PDGFAP04085 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDGFAP04085 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
PDGFAP04085 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDGFAP04085 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDGFAP04085 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
PDGFAP04085 RCN1P1-201ENST00000400413 996 ntBASIC18.71■□□□□ 0.59
PDGFAP04085 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDGFAP04085 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PDGFAP04085 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PDGFAP04085 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PDGFAP04085 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.71■□□□□ 0.59
PDGFAP04085 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PDGFAP04085 PRKY-204ENST00000533551 1019 ntBASIC18.71■□□□□ 0.59
PDGFAP04085 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.71■□□□□ 0.59
PDGFAP04085 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.71■□□□□ 0.59
PDGFAP04085 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
PDGFAP04085 AP001412.1-201ENST00000608405 714 ntBASIC18.71■□□□□ 0.59
PDGFAP04085 AC012306.2-201ENST00000609350 630 ntBASIC18.71■□□□□ 0.59
PDGFAP04085 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PDGFAP04085 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
PDGFAP04085 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDGFAP04085 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDGFAP04085 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
PDGFAP04085 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDGFAP04085 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PDGFAP04085 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDGFAP04085 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.7■□□□□ 0.58
PDGFAP04085 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.7■□□□□ 0.58
PDGFAP04085 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
PDGFAP04085 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PDGFAP04085 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PDGFAP04085 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.7■□□□□ 0.58
PDGFAP04085 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.7■□□□□ 0.58
PDGFAP04085 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.7■□□□□ 0.58
PDGFAP04085 AL135905.2-201ENST00000584934 1404 ntBASIC18.7■□□□□ 0.58
PDGFAP04085 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.7■□□□□ 0.58
PDGFAP04085 AC097493.4-201ENST00000641197 219 ntBASIC18.7■□□□□ 0.58
PDGFAP04085 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18.7■□□□□ 0.58
PDGFAP04085 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.7■□□□□ 0.58
PDGFAP04085 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.7■□□□□ 0.58
PDGFAP04085 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDGFAP04085 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.7■□□□□ 0.58
PDGFAP04085 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.7■□□□□ 0.58
PDGFAP04085 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.7■□□□□ 0.58
PDGFAP04085 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDGFAP04085 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDGFAP04085 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.69■□□□□ 0.58
PDGFAP04085 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDGFAP04085 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDGFAP04085 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.69■□□□□ 0.58
PDGFAP04085 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.69■□□□□ 0.58
PDGFAP04085 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDGFAP04085 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDGFAP04085 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
PDGFAP04085 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.69■□□□□ 0.58
PDGFAP04085 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.69■□□□□ 0.58
PDGFAP04085 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
PDGFAP04085 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PDGFAP04085 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDGFAP04085 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
PDGFAP04085 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDGFAP04085 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.69■□□□□ 0.58
PDGFAP04085 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
PDGFAP04085 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PDGFAP04085 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PDGFAP04085 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.69■□□□□ 0.58
PDGFAP04085 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.69■□□□□ 0.58
PDGFAP04085 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.68■□□□□ 0.58
PDGFAP04085 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDGFAP04085 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDGFAP04085 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms