Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
APOC1P02654 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
APOC1P02654 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
APOC1P02654 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
APOC1P02654 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
APOC1P02654 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
APOC1P02654 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
APOC1P02654 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.66■□□□□ 0.42
APOC1P02654 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
APOC1P02654 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
APOC1P02654 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.66■□□□□ 0.42
APOC1P02654 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
APOC1P02654 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.66■□□□□ 0.42
APOC1P02654 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.66■□□□□ 0.42
APOC1P02654 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
APOC1P02654 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
APOC1P02654 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
APOC1P02654 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
APOC1P02654 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
APOC1P02654 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
APOC1P02654 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
APOC1P02654 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
APOC1P02654 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
APOC1P02654 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
APOC1P02654 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
APOC1P02654 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
APOC1P02654 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
APOC1P02654 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC17.65■□□□□ 0.42
APOC1P02654 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC17.65■□□□□ 0.42
APOC1P02654 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
APOC1P02654 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
APOC1P02654 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC17.65■□□□□ 0.42
APOC1P02654 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC17.65■□□□□ 0.42
APOC1P02654 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
APOC1P02654 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
APOC1P02654 AC100791.3-201ENST00000617619 330 ntBASIC17.65■□□□□ 0.42
APOC1P02654 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
APOC1P02654 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
APOC1P02654 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
APOC1P02654 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.65■□□□□ 0.42
APOC1P02654 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
APOC1P02654 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
APOC1P02654 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
APOC1P02654 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.65■□□□□ 0.42
APOC1P02654 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.64■□□□□ 0.42
APOC1P02654 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
APOC1P02654 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
APOC1P02654 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
APOC1P02654 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
APOC1P02654 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
APOC1P02654 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
APOC1P02654 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC17.64■□□□□ 0.41
APOC1P02654 KRT18P5-201ENST00000436075 1291 ntBASIC17.64■□□□□ 0.41
APOC1P02654 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
APOC1P02654 WWOX-218ENST00000627394 894 ntTSL 5 BASIC17.64■□□□□ 0.41
APOC1P02654 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
APOC1P02654 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
APOC1P02654 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
APOC1P02654 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
APOC1P02654 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
APOC1P02654 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
APOC1P02654 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
APOC1P02654 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
APOC1P02654 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
APOC1P02654 LETM1P2-201ENST00000597330 2178 ntBASIC17.63■□□□□ 0.41
APOC1P02654 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
APOC1P02654 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
APOC1P02654 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
APOC1P02654 AC099778.1-201ENST00000568593 1911 ntBASIC17.63■□□□□ 0.41
APOC1P02654 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
APOC1P02654 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.63■□□□□ 0.41
APOC1P02654 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.63■□□□□ 0.41
APOC1P02654 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
APOC1P02654 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
APOC1P02654 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
APOC1P02654 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
APOC1P02654 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.63■□□□□ 0.41
APOC1P02654 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
APOC1P02654 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
APOC1P02654 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
APOC1P02654 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
APOC1P02654 CYP21A1P-202ENST00000354927 1481 ntBASIC17.63■□□□□ 0.41
APOC1P02654 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.63■□□□□ 0.41
APOC1P02654 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
APOC1P02654 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
APOC1P02654 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
APOC1P02654 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
APOC1P02654 DPP3P2-201ENST00000416030 1696 ntBASIC17.62■□□□□ 0.41
APOC1P02654 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
APOC1P02654 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
APOC1P02654 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.62■□□□□ 0.41
APOC1P02654 BET1L-204ENST00000410108 637 ntTSL 3 BASIC17.62■□□□□ 0.41
APOC1P02654 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
APOC1P02654 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
APOC1P02654 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
APOC1P02654 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
APOC1P02654 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
APOC1P02654 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
APOC1P02654 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
APOC1P02654 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms