Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RTN3O95197 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RTN3O95197 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RTN3O95197 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RTN3O95197 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.1■□□□□ 0.97
RTN3O95197 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
RTN3O95197 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
RTN3O95197 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RTN3O95197 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.1■□□□□ 0.97
RTN3O95197 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.1■□□□□ 0.97
RTN3O95197 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.1■□□□□ 0.97
RTN3O95197 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RTN3O95197 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
RTN3O95197 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RTN3O95197 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC21.1■□□□□ 0.97
RTN3O95197 RN7SL471P-201ENST00000580476 299 ntBASIC21.1■□□□□ 0.97
RTN3O95197 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC21.1■□□□□ 0.97
RTN3O95197 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RTN3O95197 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RTN3O95197 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.1■□□□□ 0.97
RTN3O95197 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
RTN3O95197 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC21.1■□□□□ 0.97
RTN3O95197 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
RTN3O95197 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.1■□□□□ 0.97
RTN3O95197 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.1■□□□□ 0.97
RTN3O95197 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC21.09■□□□□ 0.97
RTN3O95197 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RTN3O95197 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RTN3O95197 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RTN3O95197 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
RTN3O95197 PTBP1P-201ENST00000554374 1601 ntBASIC21.09■□□□□ 0.97
RTN3O95197 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RTN3O95197 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
RTN3O95197 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC21.09■□□□□ 0.97
RTN3O95197 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC21.09■□□□□ 0.97
RTN3O95197 AL158047.1-201ENST00000445918 881 ntBASIC21.09■□□□□ 0.97
RTN3O95197 HES2-206ENST00000489730 730 ntTSL 2 BASIC21.09■□□□□ 0.97
RTN3O95197 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC21.09■□□□□ 0.97
RTN3O95197 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC21.09■□□□□ 0.97
RTN3O95197 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC21.09■□□□□ 0.97
RTN3O95197 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC21.09■□□□□ 0.97
RTN3O95197 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RTN3O95197 AC233263.1-201ENST00000578059 224 ntBASIC21.09■□□□□ 0.97
RTN3O95197 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC21.09■□□□□ 0.97
RTN3O95197 AC066615.1-201ENST00000640911 628 ntBASIC21.09■□□□□ 0.97
RTN3O95197 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
RTN3O95197 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC21.09■□□□□ 0.97
RTN3O95197 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
RTN3O95197 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RTN3O95197 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.09■□□□□ 0.97
RTN3O95197 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.08■□□□□ 0.97
RTN3O95197 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.08■□□□□ 0.97
RTN3O95197 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
RTN3O95197 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
RTN3O95197 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
RTN3O95197 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
RTN3O95197 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC21.08■□□□□ 0.97
RTN3O95197 RPS2P52-201ENST00000469610 820 ntBASIC21.08■□□□□ 0.97
RTN3O95197 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC21.08■□□□□ 0.97
RTN3O95197 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC21.08■□□□□ 0.97
RTN3O95197 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC21.08■□□□□ 0.97
RTN3O95197 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC21.08■□□□□ 0.97
RTN3O95197 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
RTN3O95197 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RTN3O95197 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RTN3O95197 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
RTN3O95197 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
RTN3O95197 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
RTN3O95197 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.08■□□□□ 0.96
RTN3O95197 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
RTN3O95197 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RTN3O95197 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.07■□□□□ 0.96
RTN3O95197 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
RTN3O95197 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
RTN3O95197 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC21.07■□□□□ 0.96
RTN3O95197 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC21.07■□□□□ 0.96
RTN3O95197 KRT8P20-201ENST00000423953 1409 ntBASIC21.07■□□□□ 0.96
RTN3O95197 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC21.07■□□□□ 0.96
RTN3O95197 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC21.07■□□□□ 0.96
RTN3O95197 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RTN3O95197 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RTN3O95197 C1QBPP2-201ENST00000528754 825 ntBASIC21.07■□□□□ 0.96
RTN3O95197 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC21.07■□□□□ 0.96
RTN3O95197 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC21.07■□□□□ 0.96
RTN3O95197 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
RTN3O95197 AL031963.3-201ENST00000606441 850 ntBASIC21.07■□□□□ 0.96
RTN3O95197 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RTN3O95197 AC092720.2-201ENST00000602388 1665 ntBASIC21.07■□□□□ 0.96
RTN3O95197 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RTN3O95197 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
RTN3O95197 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RTN3O95197 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RTN3O95197 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
RTN3O95197 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.06■□□□□ 0.96
RTN3O95197 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
RTN3O95197 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
RTN3O95197 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RTN3O95197 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.06■□□□□ 0.96
RTN3O95197 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
RTN3O95197 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms