Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM3O75382 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.62■□□□□ 0.57
TRIM3O75382 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.62■□□□□ 0.57
TRIM3O75382 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM3O75382 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM3O75382 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.61■□□□□ 0.57
TRIM3O75382 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM3O75382 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
TRIM3O75382 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM3O75382 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM3O75382 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM3O75382 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM3O75382 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.61■□□□□ 0.57
TRIM3O75382 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM3O75382 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.61■□□□□ 0.57
TRIM3O75382 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM3O75382 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.61■□□□□ 0.57
TRIM3O75382 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.61■□□□□ 0.57
TRIM3O75382 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.61■□□□□ 0.57
TRIM3O75382 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM3O75382 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM3O75382 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM3O75382 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
TRIM3O75382 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM3O75382 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM3O75382 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM3O75382 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
TRIM3O75382 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM3O75382 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.6■□□□□ 0.57
TRIM3O75382 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM3O75382 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.6■□□□□ 0.57
TRIM3O75382 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
TRIM3O75382 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM3O75382 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
TRIM3O75382 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.6■□□□□ 0.57
TRIM3O75382 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM3O75382 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM3O75382 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM3O75382 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM3O75382 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM3O75382 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM3O75382 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.6■□□□□ 0.57
TRIM3O75382 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.6■□□□□ 0.57
TRIM3O75382 AL356652.1-201ENST00000615962 565 ntBASIC18.6■□□□□ 0.57
TRIM3O75382 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.6■□□□□ 0.57
TRIM3O75382 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM3O75382 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.6■□□□□ 0.57
TRIM3O75382 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM3O75382 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM3O75382 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM3O75382 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM3O75382 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.6■□□□□ 0.57
TRIM3O75382 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM3O75382 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.59■□□□□ 0.57
TRIM3O75382 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM3O75382 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM3O75382 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.59■□□□□ 0.57
TRIM3O75382 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM3O75382 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM3O75382 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM3O75382 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM3O75382 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM3O75382 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.59■□□□□ 0.57
TRIM3O75382 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM3O75382 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM3O75382 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.59■□□□□ 0.57
TRIM3O75382 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM3O75382 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM3O75382 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.59■□□□□ 0.57
TRIM3O75382 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.59■□□□□ 0.57
TRIM3O75382 RNA5SP413-201ENST00000516373 109 ntBASIC18.59■□□□□ 0.57
TRIM3O75382 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM3O75382 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM3O75382 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
TRIM3O75382 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.59■□□□□ 0.57
TRIM3O75382 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.59■□□□□ 0.57
TRIM3O75382 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.59■□□□□ 0.57
TRIM3O75382 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM3O75382 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM3O75382 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
TRIM3O75382 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM3O75382 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.59■□□□□ 0.57
TRIM3O75382 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM3O75382 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
TRIM3O75382 AL020996.1-203ENST00000536896 2307 ntBASIC18.58■□□□□ 0.57
TRIM3O75382 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRIM3O75382 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TRIM3O75382 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
TRIM3O75382 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.58■□□□□ 0.57
TRIM3O75382 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.58■□□□□ 0.57
TRIM3O75382 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM3O75382 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM3O75382 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.58■□□□□ 0.56
TRIM3O75382 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
TRIM3O75382 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.56
TRIM3O75382 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM3O75382 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM3O75382 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM3O75382 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.58■□□□□ 0.56
TRIM3O75382 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms