Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.2■□□□□ 0.66
CPNE3O75131 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CPNE3O75131 AC006557.6-201ENST00000623071 864 ntBASIC19.2■□□□□ 0.66
CPNE3O75131 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.2■□□□□ 0.66
CPNE3O75131 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.2■□□□□ 0.66
CPNE3O75131 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPNE3O75131 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.2■□□□□ 0.66
CPNE3O75131 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPNE3O75131 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.2■□□□□ 0.66
CPNE3O75131 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.2■□□□□ 0.66
CPNE3O75131 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CPNE3O75131 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CPNE3O75131 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.19■□□□□ 0.66
CPNE3O75131 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPNE3O75131 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPNE3O75131 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPNE3O75131 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CPNE3O75131 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
CPNE3O75131 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CPNE3O75131 MIR718-201ENST00000390190 70 ntBASIC19.19■□□□□ 0.66
CPNE3O75131 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.19■□□□□ 0.66
CPNE3O75131 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.19■□□□□ 0.66
CPNE3O75131 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.19■□□□□ 0.66
CPNE3O75131 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CPNE3O75131 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.19■□□□□ 0.66
CPNE3O75131 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CPNE3O75131 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CPNE3O75131 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPNE3O75131 AC120498.8-201ENST00000614275 531 ntBASIC19.19■□□□□ 0.66
CPNE3O75131 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPNE3O75131 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CPNE3O75131 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.19■□□□□ 0.66
CPNE3O75131 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPNE3O75131 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPNE3O75131 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.19■□□□□ 0.66
CPNE3O75131 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CPNE3O75131 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CPNE3O75131 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CPNE3O75131 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.18■□□□□ 0.66
CPNE3O75131 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CPNE3O75131 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CPNE3O75131 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CPNE3O75131 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CPNE3O75131 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
CPNE3O75131 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CPNE3O75131 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CPNE3O75131 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.18■□□□□ 0.66
CPNE3O75131 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CPNE3O75131 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CPNE3O75131 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CPNE3O75131 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.18■□□□□ 0.66
CPNE3O75131 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CPNE3O75131 AL049796.1-201ENST00000565336 1766 ntBASIC19.18■□□□□ 0.66
CPNE3O75131 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CPNE3O75131 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.18■□□□□ 0.66
CPNE3O75131 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CPNE3O75131 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CPNE3O75131 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CPNE3O75131 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CPNE3O75131 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CPNE3O75131 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CPNE3O75131 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.17■□□□□ 0.66
CPNE3O75131 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.17■□□□□ 0.66
CPNE3O75131 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
CPNE3O75131 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
CPNE3O75131 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CPNE3O75131 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.17■□□□□ 0.66
CPNE3O75131 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CPNE3O75131 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.17■□□□□ 0.66
CPNE3O75131 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.17■□□□□ 0.66
CPNE3O75131 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
CPNE3O75131 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CPNE3O75131 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.17■□□□□ 0.66
CPNE3O75131 MIR2861-201ENST00000636310 90 ntBASIC19.17■□□□□ 0.66
CPNE3O75131 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.17■□□□□ 0.66
CPNE3O75131 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
CPNE3O75131 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CPNE3O75131 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
CPNE3O75131 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.17■□□□□ 0.66
CPNE3O75131 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CPNE3O75131 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CPNE3O75131 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CPNE3O75131 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.17■□□□□ 0.66
CPNE3O75131 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CPNE3O75131 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CPNE3O75131 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CPNE3O75131 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.16■□□□□ 0.66
CPNE3O75131 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CPNE3O75131 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CPNE3O75131 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CPNE3O75131 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CPNE3O75131 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CPNE3O75131 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
CPNE3O75131 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.16■□□□□ 0.66
CPNE3O75131 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CPNE3O75131 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CPNE3O75131 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CPNE3O75131 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CPNE3O75131 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CPNE3O75131 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms