Protein–RNA interactions for Protein: O60931

CTNS, Cystinosin, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNSO60931 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.79■□□□□ 0.6
CTNSO60931 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTNSO60931 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.79■□□□□ 0.6
CTNSO60931 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTNSO60931 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTNSO60931 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTNSO60931 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CTNSO60931 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTNSO60931 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTNSO60931 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.78■□□□□ 0.6
CTNSO60931 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTNSO60931 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTNSO60931 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTNSO60931 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTNSO60931 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTNSO60931 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTNSO60931 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.78■□□□□ 0.6
CTNSO60931 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.78■□□□□ 0.6
CTNSO60931 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.78■□□□□ 0.6
CTNSO60931 UNC93B4-201ENST00000505679 747 ntBASIC18.78■□□□□ 0.6
CTNSO60931 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.78■□□□□ 0.6
CTNSO60931 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.78■□□□□ 0.6
CTNSO60931 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CTNSO60931 AC006557.6-201ENST00000623071 864 ntBASIC18.78■□□□□ 0.6
CTNSO60931 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTNSO60931 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CTNSO60931 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTNSO60931 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CTNSO60931 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.78■□□□□ 0.6
CTNSO60931 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CTNSO60931 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CTNSO60931 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CTNSO60931 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CTNSO60931 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CTNSO60931 KRT16P6-202ENST00000425692 1426 ntBASIC18.77■□□□□ 0.6
CTNSO60931 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.77■□□□□ 0.6
CTNSO60931 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CTNSO60931 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CTNSO60931 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.77■□□□□ 0.6
CTNSO60931 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.77■□□□□ 0.6
CTNSO60931 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.77■□□□□ 0.6
CTNSO60931 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.77■□□□□ 0.6
CTNSO60931 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CTNSO60931 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CTNSO60931 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CTNSO60931 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
CTNSO60931 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CTNSO60931 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.77■□□□□ 0.59
CTNSO60931 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CTNSO60931 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
CTNSO60931 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.76■□□□□ 0.59
CTNSO60931 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CTNSO60931 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CTNSO60931 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CTNSO60931 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CTNSO60931 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CTNSO60931 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CTNSO60931 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.76■□□□□ 0.59
CTNSO60931 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
CTNSO60931 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.76■□□□□ 0.59
CTNSO60931 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CTNSO60931 SOX15-203ENST00000570788 1093 ntBASIC18.76■□□□□ 0.59
CTNSO60931 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CTNSO60931 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CTNSO60931 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CTNSO60931 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CTNSO60931 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CTNSO60931 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CTNSO60931 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.76■□□□□ 0.59
CTNSO60931 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CTNSO60931 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CTNSO60931 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CTNSO60931 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
CTNSO60931 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CTNSO60931 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
CTNSO60931 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CTNSO60931 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CTNSO60931 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CTNSO60931 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CTNSO60931 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CTNSO60931 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CTNSO60931 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CTNSO60931 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.75■□□□□ 0.59
CTNSO60931 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.75■□□□□ 0.59
CTNSO60931 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.75■□□□□ 0.59
CTNSO60931 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CTNSO60931 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.75■□□□□ 0.59
CTNSO60931 AC120498.8-201ENST00000614275 531 ntBASIC18.75■□□□□ 0.59
CTNSO60931 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CTNSO60931 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CTNSO60931 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.75■□□□□ 0.59
CTNSO60931 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.75■□□□□ 0.59
CTNSO60931 BX119927.1-201ENST00000636596 1552 ntBASIC18.75■□□□□ 0.59
CTNSO60931 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CTNSO60931 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.75■□□□□ 0.59
CTNSO60931 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CTNSO60931 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CTNSO60931 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CTNSO60931 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.75■□□□□ 0.59
CTNSO60931 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms