Protein–RNA interactions for Protein: O60225

SSX5, Protein SSX5, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX5O60225 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SSX5O60225 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SSX5O60225 AL691432.2-201ENST00000607222 2038 ntBASIC17.12■□□□□ 0.33
SSX5O60225 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SSX5O60225 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.12■□□□□ 0.33
SSX5O60225 MPST-204ENST00000404393 1329 ntTSL 5 BASIC17.12■□□□□ 0.33
SSX5O60225 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SSX5O60225 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.12■□□□□ 0.33
SSX5O60225 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SSX5O60225 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SSX5O60225 AP000974.1-201ENST00000623909 2387 ntBASIC17.11■□□□□ 0.33
SSX5O60225 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SSX5O60225 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SSX5O60225 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SSX5O60225 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SSX5O60225 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.11■□□□□ 0.33
SSX5O60225 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.11■□□□□ 0.33
SSX5O60225 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.11■□□□□ 0.33
SSX5O60225 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SSX5O60225 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SSX5O60225 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SSX5O60225 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SSX5O60225 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.11■□□□□ 0.33
SSX5O60225 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SSX5O60225 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SSX5O60225 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC17.11■□□□□ 0.33
SSX5O60225 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.11■□□□□ 0.33
SSX5O60225 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC17.11■□□□□ 0.33
SSX5O60225 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SSX5O60225 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.11■□□□□ 0.33
SSX5O60225 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SSX5O60225 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SSX5O60225 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SSX5O60225 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SSX5O60225 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.11■□□□□ 0.33
SSX5O60225 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SSX5O60225 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSX5O60225 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSX5O60225 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SSX5O60225 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSX5O60225 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.1■□□□□ 0.33
SSX5O60225 AC116050.2-201ENST00000612102 1779 ntBASIC17.1■□□□□ 0.33
SSX5O60225 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
SSX5O60225 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SSX5O60225 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SSX5O60225 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SSX5O60225 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.1■□□□□ 0.33
SSX5O60225 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSX5O60225 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSX5O60225 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
SSX5O60225 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SSX5O60225 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SSX5O60225 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC17.1■□□□□ 0.33
SSX5O60225 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC17.1■□□□□ 0.33
SSX5O60225 GRAMD4P4-201ENST00000613563 1115 ntBASIC17.1■□□□□ 0.33
SSX5O60225 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SSX5O60225 KRT16P2-201ENST00000414673 1423 ntBASIC17.1■□□□□ 0.33
SSX5O60225 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
SSX5O60225 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSX5O60225 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSX5O60225 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SSX5O60225 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSX5O60225 TMEM179-206ENST00000616017 1645 ntBASIC17.1■□□□□ 0.33
SSX5O60225 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
SSX5O60225 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
SSX5O60225 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SSX5O60225 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSX5O60225 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSX5O60225 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SSX5O60225 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSX5O60225 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSX5O60225 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.09■□□□□ 0.33
SSX5O60225 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
SSX5O60225 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSX5O60225 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSX5O60225 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.09■□□□□ 0.33
SSX5O60225 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SSX5O60225 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SSX5O60225 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.09■□□□□ 0.33
SSX5O60225 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSX5O60225 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
SSX5O60225 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC17.09■□□□□ 0.33
SSX5O60225 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC17.09■□□□□ 0.33
SSX5O60225 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SSX5O60225 AP001330.3-201ENST00000520123 633 ntBASIC17.09■□□□□ 0.33
SSX5O60225 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC17.09■□□□□ 0.33
SSX5O60225 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SSX5O60225 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSX5O60225 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SSX5O60225 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSX5O60225 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSX5O60225 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.09■□□□□ 0.33
SSX5O60225 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSX5O60225 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSX5O60225 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.09■□□□□ 0.33
SSX5O60225 AC005332.7-201ENST00000614046 2005 ntBASIC17.09■□□□□ 0.33
SSX5O60225 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
SSX5O60225 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
SSX5O60225 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSX5O60225 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms