Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TNRC18O15417 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TNRC18O15417 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
TNRC18O15417 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
TNRC18O15417 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TNRC18O15417 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TNRC18O15417 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC22.05■■□□□ 1.12
TNRC18O15417 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
TNRC18O15417 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC22.05■■□□□ 1.12
TNRC18O15417 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TNRC18O15417 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC22.05■■□□□ 1.12
TNRC18O15417 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
TNRC18O15417 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC22.05■■□□□ 1.12
TNRC18O15417 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC22.05■■□□□ 1.12
TNRC18O15417 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
TNRC18O15417 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
TNRC18O15417 SLC25A1P2-201ENST00000430693 912 ntBASIC22.05■■□□□ 1.12
TNRC18O15417 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC22.05■■□□□ 1.12
TNRC18O15417 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
TNRC18O15417 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC22.04■■□□□ 1.12
TNRC18O15417 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TNRC18O15417 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TNRC18O15417 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TNRC18O15417 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC22.04■■□□□ 1.12
TNRC18O15417 PENK-208ENST00000523051 772 ntTSL 5 BASIC22.04■■□□□ 1.12
TNRC18O15417 AC010653.2-201ENST00000623505 997 ntBASIC22.04■■□□□ 1.12
TNRC18O15417 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TNRC18O15417 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TNRC18O15417 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TNRC18O15417 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC22.04■■□□□ 1.12
TNRC18O15417 GGCT-205ENST00000409436 954 ntTSL 3 BASIC22.04■■□□□ 1.12
TNRC18O15417 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC22.04■■□□□ 1.12
TNRC18O15417 PNN-205ENST00000556530 601 ntTSL 2 BASIC22.04■■□□□ 1.12
TNRC18O15417 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC22.04■■□□□ 1.12
TNRC18O15417 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC22.04■■□□□ 1.12
TNRC18O15417 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TNRC18O15417 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
TNRC18O15417 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC22.03■■□□□ 1.12
TNRC18O15417 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC22.03■■□□□ 1.12
TNRC18O15417 AL023973.1-201ENST00000624619 620 ntBASIC22.03■■□□□ 1.12
TNRC18O15417 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TNRC18O15417 IL9RP2-201ENST00000423948 1312 ntBASIC22.03■■□□□ 1.12
TNRC18O15417 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TNRC18O15417 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TNRC18O15417 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC22.03■■□□□ 1.12
TNRC18O15417 MED17-227ENST00000640521 2047 ntTSL 5 BASIC22.03■■□□□ 1.12
TNRC18O15417 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TNRC18O15417 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC22.03■■□□□ 1.12
TNRC18O15417 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
TNRC18O15417 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC22.02■■□□□ 1.12
TNRC18O15417 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC22.02■■□□□ 1.12
TNRC18O15417 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC22.02■■□□□ 1.12
TNRC18O15417 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
TNRC18O15417 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
TNRC18O15417 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
TNRC18O15417 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC22.02■■□□□ 1.12
TNRC18O15417 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC22.02■■□□□ 1.12
TNRC18O15417 AL512604.3-201ENST00000569583 964 ntBASIC22.02■■□□□ 1.12
TNRC18O15417 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.11
TNRC18O15417 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC22.02■■□□□ 1.11
TNRC18O15417 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC22.02■■□□□ 1.11
TNRC18O15417 SLC25A1P1-201ENST00000528351 927 ntBASIC22.02■■□□□ 1.11
TNRC18O15417 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC22.02■■□□□ 1.11
TNRC18O15417 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
TNRC18O15417 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
TNRC18O15417 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC22.01■■□□□ 1.11
TNRC18O15417 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC22.01■■□□□ 1.11
TNRC18O15417 AC026471.6-201ENST00000622954 1905 ntBASIC22.01■■□□□ 1.11
TNRC18O15417 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC22.01■■□□□ 1.11
TNRC18O15417 AC112907.2-201ENST00000448639 330 ntBASIC22.01■■□□□ 1.11
TNRC18O15417 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC22.01■■□□□ 1.11
TNRC18O15417 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
TNRC18O15417 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC22.01■■□□□ 1.11
TNRC18O15417 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
TNRC18O15417 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
TNRC18O15417 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
TNRC18O15417 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
TNRC18O15417 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
TNRC18O15417 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
TNRC18O15417 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
TNRC18O15417 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC22■■□□□ 1.11
TNRC18O15417 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC22■■□□□ 1.11
TNRC18O15417 AC092338.2-201ENST00000568827 1415 ntBASIC22■■□□□ 1.11
TNRC18O15417 AC116562.4-202ENST00000641738 218 ntBASIC22■■□□□ 1.11
TNRC18O15417 AL035633.1-201ENST00000406139 838 ntBASIC22■■□□□ 1.11
TNRC18O15417 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC22■■□□□ 1.11
TNRC18O15417 AL023803.3-201ENST00000615559 522 ntBASIC22■■□□□ 1.11
TNRC18O15417 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC22■■□□□ 1.11
TNRC18O15417 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TNRC18O15417 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
TNRC18O15417 HLA-J-202ENST00000469281 1241 ntBASIC21.99■■□□□ 1.11
TNRC18O15417 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC21.99■■□□□ 1.11
TNRC18O15417 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
TNRC18O15417 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
TNRC18O15417 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TNRC18O15417 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.99■■□□□ 1.11
TNRC18O15417 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TNRC18O15417 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
TNRC18O15417 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
TNRC18O15417 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms