Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC23.02■■□□□ 1.28
ATP2A1O14983 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC23.02■■□□□ 1.28
ATP2A1O14983 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC23.02■■□□□ 1.28
ATP2A1O14983 SNX21-213ENST00000614929 587 ntTSL 5 BASIC23.02■■□□□ 1.28
ATP2A1O14983 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
ATP2A1O14983 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC23.02■■□□□ 1.28
ATP2A1O14983 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
ATP2A1O14983 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC23.02■■□□□ 1.28
ATP2A1O14983 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
ATP2A1O14983 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
ATP2A1O14983 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC23.01■■□□□ 1.27
ATP2A1O14983 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC23.01■■□□□ 1.27
ATP2A1O14983 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC23.01■■□□□ 1.27
ATP2A1O14983 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
ATP2A1O14983 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
ATP2A1O14983 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
ATP2A1O14983 AL353807.1-201ENST00000427475 662 ntBASIC23.01■■□□□ 1.27
ATP2A1O14983 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
ATP2A1O14983 PENK-204ENST00000518770 863 ntTSL 2 BASIC23.01■■□□□ 1.27
ATP2A1O14983 AF186192.3-201ENST00000583427 947 ntBASIC23.01■■□□□ 1.27
ATP2A1O14983 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC23.01■■□□□ 1.27
ATP2A1O14983 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
ATP2A1O14983 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
ATP2A1O14983 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
ATP2A1O14983 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC23.01■■□□□ 1.27
ATP2A1O14983 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC23.01■■□□□ 1.27
ATP2A1O14983 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
ATP2A1O14983 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
ATP2A1O14983 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC23■■□□□ 1.27
ATP2A1O14983 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
ATP2A1O14983 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC23■■□□□ 1.27
ATP2A1O14983 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
ATP2A1O14983 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC23■■□□□ 1.27
ATP2A1O14983 SAPCD2P4-201ENST00000424595 1171 ntBASIC23■■□□□ 1.27
ATP2A1O14983 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC23■■□□□ 1.27
ATP2A1O14983 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC23■■□□□ 1.27
ATP2A1O14983 PNN-205ENST00000556530 601 ntTSL 2 BASIC23■■□□□ 1.27
ATP2A1O14983 HTR7P1-201ENST00000538670 1336 ntBASIC23■■□□□ 1.27
ATP2A1O14983 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
ATP2A1O14983 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
ATP2A1O14983 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC23■■□□□ 1.27
ATP2A1O14983 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC23■■□□□ 1.27
ATP2A1O14983 STK25-234ENST00000535007 2459 ntTSL 2 BASIC23■■□□□ 1.27
ATP2A1O14983 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
ATP2A1O14983 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
ATP2A1O14983 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
ATP2A1O14983 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC23■■□□□ 1.27
ATP2A1O14983 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC23■■□□□ 1.27
ATP2A1O14983 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
ATP2A1O14983 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
ATP2A1O14983 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
ATP2A1O14983 ECEL1P3-201ENST00000427961 737 ntBASIC22.99■■□□□ 1.27
ATP2A1O14983 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
ATP2A1O14983 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC22.99■■□□□ 1.27
ATP2A1O14983 GRAP-204ENST00000573099 846 ntTSL 3 BASIC22.99■■□□□ 1.27
ATP2A1O14983 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC22.99■■□□□ 1.27
ATP2A1O14983 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
ATP2A1O14983 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
ATP2A1O14983 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
ATP2A1O14983 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC22.99■■□□□ 1.27
ATP2A1O14983 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
ATP2A1O14983 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
ATP2A1O14983 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
ATP2A1O14983 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
ATP2A1O14983 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
ATP2A1O14983 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
ATP2A1O14983 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
ATP2A1O14983 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
ATP2A1O14983 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC22.98■■□□□ 1.27
ATP2A1O14983 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
ATP2A1O14983 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC22.98■■□□□ 1.27
ATP2A1O14983 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
ATP2A1O14983 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC22.98■■□□□ 1.27
ATP2A1O14983 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC22.98■■□□□ 1.27
ATP2A1O14983 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC22.98■■□□□ 1.27
ATP2A1O14983 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
ATP2A1O14983 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
ATP2A1O14983 CLDN5-201ENST00000403084 2357 ntBASIC22.98■■□□□ 1.27
ATP2A1O14983 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC22.98■■□□□ 1.27
ATP2A1O14983 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
ATP2A1O14983 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
ATP2A1O14983 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
ATP2A1O14983 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC22.97■■□□□ 1.27
ATP2A1O14983 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
ATP2A1O14983 H19-201ENST00000411754 1788 ntTSL 5 BASIC22.97■■□□□ 1.27
ATP2A1O14983 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
ATP2A1O14983 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
ATP2A1O14983 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC22.97■■□□□ 1.27
ATP2A1O14983 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
ATP2A1O14983 TSPY15P-201ENST00000457163 923 ntBASIC22.97■■□□□ 1.27
ATP2A1O14983 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC22.97■■□□□ 1.27
ATP2A1O14983 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC22.97■■□□□ 1.27
ATP2A1O14983 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC22.97■■□□□ 1.27
ATP2A1O14983 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC22.97■■□□□ 1.27
ATP2A1O14983 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC22.97■■□□□ 1.27
ATP2A1O14983 LINC01023-201ENST00000606054 436 ntBASIC22.97■■□□□ 1.27
ATP2A1O14983 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
ATP2A1O14983 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC22.97■■□□□ 1.27
ATP2A1O14983 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
ATP2A1O14983 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms